Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1866 ATGCCAGAGGGGTTCCTGGAAAGAACCAAGGATAGGGGAATGGTGGTGAAGTCATGGGCGCCGCAGGTGGCGGTGTTGAATCACCGATCGGTGGGTGGATTTGTAACCCATTGCGGGTGGAACTCGGTGTTGGAGGCAGTGGTCGCAGGAGTGCCAATGGTGGCATGGCCTCTATATGCTGAGCAGCATCTGAATAAGGCTGTTCTTGTGGAGGATATGAAGATGGCTATTGGAGTGGAGCAGAGGGATGAGGATATGTTTGTGAGTGGAGCTGAGGTGGAGAGGAGAGTGAGAGAGTTGATGGAGTGTGAAGAGGGGAGGGAGCTGAGAGAAAGAAGCAGGAAGATGAGAGAGATGGCTTTGGCAGCTTGGAAAGAGGGGGGTTCATCCACCACTGCCCTTGCCAAATTGGCTGATGTCTGGAGTCAAGATTGA 435 0.5333 MPEGFLERTKDRGMVVKSWAPQVAVLNHRSVGGFVTHCGWNSVLEAVVAGVPMVAWPLYAEQHLNKAVLVEDMKMAIGVEQRDEDMFVSGAEVERRVRELMECEEGRELRERSRKMREMALAAWKEGGSSTTALAKLADVWSQD* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1866 144 Gene3D Glycogen Phosphorylase B; 1 125 - -
Vvi18g1866 144 FunFam Glycosyltransferase 1 125 - -
Vvi18g1866 144 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 1 141 - -
Vvi18g1866 144 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 13 70 IPR002213 GO:0008194
Vvi18g1866 144 ProSitePatterns UDP-glycosyltransferases signature. 19 62 IPR035595 -
Vvi18g1866 144 CDD GT1_Gtf-like 2 123 IPR002213 GO:0008194
Vvi18g1866 144 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1866 Vvi-Chr18 25542375 25542809 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1866 1 142 Glycosyltransferase AT3G16520 60.140 5.14e-56 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1866 K22845 - vvi:104882785 289.271