Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1864 ATGTCCTCCATTCCCTCCAGCAACTCTCCAGAGCTTCCACCATTCGGGCATTCATCATCGACTACTTTTGCGCTTCAGCTCTTCCTGCGGGTCGTGGCCTTGGAATTCCCACTTACTACTTCCTCACCTCCGGTGCTGCTTCTGTTGCTGCCGTCCTCTACTTTCCGACAATTCACAAACAGACTGAGAGCAGCAATAAGAGCTTCAAGGACATGCCCACTACCTTTATACACTTTCCTGGGTTGCCTCCGCTACAAGTCCACTCGAATGCCTCAACCATTGCTCAACCGAGACGACCCCGCCTATGATGATATGCTATACTTCTCAGAGCTTTTGCCCAAATCCGATGGACTTGTGATAAATACATTCGATGACCTTGAGCCGATAGCCCTTAAGACAATCAGAGAGGGGACATGTATTCCCAATGGGCCAACTCCGTCAGTTTACTACATCGGCCCTTTGATTGCTGATACTGGTGAAGATGAAAGCAATATTGCTGGTAATAAAGCTCGTCATGGTTGTTTGTCCTGGCTTGACACACAGCCAAGTCAGAGTGTTGTCTTCTTGTGCTTCGGGAGCAAGGGAACGTTCTCTCCCGCTCAGATGAAGGAGATAGCTAATGGACTGGAAAGAAGTGGCAAGAGATTCTTGTGGGTGGTGAAGAACCCACCATCCACCGACAAAAGCAAGCCGATTGCAGTGACGGCCGATGTTGATTTGAATGTTCTAATGCCAAAGGGGTTCCTGGAAAGAACCAAGGATAGGGGAATGGTGGTGAAGTCATGGGCGCCGCAGGTGGCGGTACTGAATCACCCATCGGTGGGAGGATTTGTAACCCATTGCGGGTGGAACTCAATGTTGGAGGCAGTGGTTGCAGGGGTGCCAATGGTGGCCTGGCCTCTATATGCTGAGCAGCATCTGAATAAGGCAGCTCTGGTGGAGGTTATGAAGATGGCTATTGGAGTGGAGCAGAGGGATGAGGATATGTTTGTGAGTGGAGCTGAGGTGGAGGGGAGAGTGAGGGAGTTGATGGAGTGTGAGGAGGGGAGGGAGCTGAGGGAAAGAAGCAGGAAGATGAGAGAGATGGCTTTGGCAGCTTGGAAAGATGGGGGCTCATCCACCACTGCCCTCGCCAAATTGGCTGATGTCTGGAATCAAGATTGA 1164 0.5095 MSSIPSSNSPELPPFGHSSSTTFALQLFLRVVALEFPLTTSSPPVLLLLLPSSTFRQFTNRLRAAIRASRTCPLPLYTFLGCLRYKSTRMPQPLLNRDDPAYDDMLYFSELLPKSDGLVINTFDDLEPIALKTIREGTCIPNGPTPSVYYIGPLIADTGEDESNIAGNKARHGCLSWLDTQPSQSVVFLCFGSKGTFSPAQMKEIANGLERSGKRFLWVVKNPPSTDKSKPIAVTADVDLNVLMPKGFLERTKDRGMVVKSWAPQVAVLNHPSVGGFVTHCGWNSMLEAVVAGVPMVAWPLYAEQHLNKAALVEVMKMAIGVEQRDEDMFVSGAEVEGRVRELMECEEGRELRERSRKMREMALAAWKDGGSSTTALAKLADVWNQD* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1864 387 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 76 384 - -
Vvi18g1864 387 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 168 314 IPR002213 GO:0008194
Vvi18g1864 387 FunFam Glycosyltransferase 172 368 - -
Vvi18g1864 387 FunFam UDP-glycosyltransferase 88F4 90 157 - -
Vvi18g1864 387 PANTHER GLYCOSYLTRANSFERASE 77 385 - -
Vvi18g1864 387 Gene3D Glycogen Phosphorylase B; 77 373 - -
Vvi18g1864 387 Gene3D Glycogen Phosphorylase B; 172 368 - -
Vvi18g1864 387 ProSitePatterns UDP-glycosyltransferases signature. 262 305 IPR035595 -
Vvi18g1864 387 CDD GT1_Gtf-like 72 366 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1864 Vvi-Chr18 25500033 25501626 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1864 86 385 Glycosyltransferase AT3G16520 53.488 3.40e-100 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1864 K22845 - vvi:100265418 615.15