Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1863 ATGCCAGAAGGGTTCTTGGAAAGAACCAATAATAGAGGAATGGTGGTGAAGTCCTGCGCGCCGCAGGTGGCGGTGCTGAGACACCAATCCGTGGGTGGATTCGTGACTCATTGCGGGTGGAACTCAGTGTTGGAAGCGGTGTCTGCGGGAGTGCCAATGGTGGCATGGCCTCTCCACGCCGAACAACACCTGAATATGGCTGTTTTGGTCGAGAATATGAAGATGGCCATTGGTGTGGAGCAGAGAAATGGTGACAGGTTTGTGAGTGGGGCTGAGTTGGAGAGGCGACTCAAAGGGTTGATGGATTCTGAAGAGGGGAGAGATCTGAGAGAGAGAATTAATAAGACCAGAGAGATGGCGGTGGAAGCTTGGAGAGAGGAGGGCTCATCCACTACTGCCCTTGCCAAGTTAGCCGACATCTGGAAGCATGATCATGGATGCAAGTTGGTCGATTGA 456 0.5263 MPEGFLERTNNRGMVVKSCAPQVAVLRHQSVGGFVTHCGWNSVLEAVSAGVPMVAWPLHAEQHLNMAVLVENMKMAIGVEQRNGDRFVSGAELERRLKGLMDSEEGRDLRERINKTREMAVEAWREEGSSTTALAKLADIWKHDHGCKLVD* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1863 151 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 15 72 IPR002213 GO:0008194
Vvi18g1863 151 PANTHER UDP-GLYCOSYLTRANSFERASE 72E1 1 144 - -
Vvi18g1863 151 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 1 145 - -
Vvi18g1863 151 Gene3D Glycogen Phosphorylase B; 1 125 - -
Vvi18g1863 151 CDD GT1_Gtf-like 2 120 IPR002213 GO:0008194
Vvi18g1863 151 FunFam Glycosyltransferase 1 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1863 Vvi-Chr18 25480999 25481454 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1863 1 141 Glycosyltransferase AT3G16520 53.521 3.94e-44 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1863 K22845 - vvi:100247819 289.656