Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1859 ATGCCCACTACCTTTATAGACTTTCCTGGGTTGCCTCCGCTACAAGCCACTCGAATGCTTCAACCATGGCTCAACCGAGACGACCCCGCCTATTATGATATGCTACACTTCTCAGAGCTTTTGCCAAAATCCGATGGACTTTTGATAAATACAATCGATGACCTGGAGCCAATAGCCGTTAAGACAATCAGGGAGGGAACATGTGTTCCCAATGGGCCAACTCCTCCAGTTTACTGCATCGGCCCTTTGATTGCTGATACTGGTGAAGATGAAAGCAATAGTGCTGGTAGTATAGCTCGCCATGGCTGCTTGTCCTGGCTTGACACACAGCCAATTCAGAGTGTTGTCTTCTTGTGCTTCGGGAGCAACGGAGCGTTCTCGCCCGCTCAGGTGAAGGAGATAGCTAATGGACTGGAAAGAAGTGGCAAGAGATTCTTGTGGGTGGTGAAGAACCCACCATCCAACGACAAAAGCAATCAGATTGCAGTGACGGCCGATGTTGATTTGGATGCTCTAATGCCAGAGGGGTTCCTGGAAAGAACCAAGGATAGGGGAATGGTGGTGAAGTCATGGGCGCCGCAGGTGGCGGTGTTGAATCACCCATCGGTGGGTGGATTTGTAACCCATTGCGGGTGGAACTCGGTGTTGGAGGCAGTGGTCGCAGGAGTGCCAATGGTGGCATGGCCTCTATATGCTGAGCAGCATCTGAATAAGGCTGTTCTTGTGGAGGATATGAAGATGGCTATTGGAGTGGAGCAGAGGGATGAGGATATGTTTGTGAGTGGAGCTGAGGTGGAGAGGAGAGTGAGAGAGTTGATGGAGTGTGAAGAGGGGAGGGAGCTGAGAGAAAGAAGCAGGAAGATGAGAGAGATGGCTTTGGCAGCATGGAAAGAGGGGGGTTCATCCACCACTGCCCTTGCCAAATTGGCTGATATCTGGAGTCAAGATTGA 951 0.5089 MPTTFIDFPGLPPLQATRMLQPWLNRDDPAYYDMLHFSELLPKSDGLLINTIDDLEPIAVKTIREGTCVPNGPTPPVYCIGPLIADTGEDESNSAGSIARHGCLSWLDTQPIQSVVFLCFGSNGAFSPAQVKEIANGLERSGKRFLWVVKNPPSNDKSNQIAVTADVDLDALMPEGFLERTKDRGMVVKSWAPQVAVLNHPSVGGFVTHCGWNSVLEAVVAGVPMVAWPLYAEQHLNKAVLVEDMKMAIGVEQRDEDMFVSGAEVERRVRELMECEEGRELRERSRKMREMALAAWKEGGSSTTALAKLADIWSQD* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1859 316 PANTHER GLYCOSYLTRANSFERASE 5 314 - -
Vvi18g1859 316 FunFam UDP-glycosyltransferase 88F4 19 84 - -
Vvi18g1859 316 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 313 - -
Vvi18g1859 316 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 106 242 IPR002213 GO:0008194
Vvi18g1859 316 ProSitePatterns UDP-glycosyltransferases signature. 191 234 IPR035595 -
Vvi18g1859 316 FunFam Glycosyltransferase 101 297 - -
Vvi18g1859 316 CDD GT1_Gtf-like 29 295 IPR002213 GO:0008194
Vvi18g1859 316 Gene3D Glycogen Phosphorylase B; 101 297 - -
Vvi18g1859 316 Gene3D Glycogen Phosphorylase B; 6 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1859 Vvi-Chr18 25436532 25437482 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1859 1 314 Glycosyltransferase AT3G16520 52.381 3.27e-103 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1859 K22845 - vvi:104882785 647.121