Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1856 ATGTCACTCCACAATCCACATCATATAAGTATATCATCTCTAACATCGACTTCATCTGCAGATCTCATTCTGAGTTCCTCCCAATTCCAAGGATCCAAGGTGGTACCAAAAATGAAGGATGCCATAGTCCTTTACCCAGCTCCAGGGATTGGCCACTTGTTGTCCATGGTAGAGCTTGGTAAGCTCATTCTTAGCCGCTACAACTGCGAATTCTCCATTATTATTCTCCTCACAACTGGCCCTTTTGACACTCCAGCCACCACCTCTCACATCGATCGAATCTCCCAAACCACCTCTTCCATCTCCTTCCACCGCTTCCCGTATCTCCCATTCACCGCATCTCCAACTCTTGGTCGCCTGGCCAACATGTTCGAGTTCCTGAGTCTCAATGATTCTAATGTTCTCCAATCTCTTCAGCAGCTCTCGGAAGCTTCTTCCATTCGGGCTGTTATACTCGACTCTTTTTGCACTTCAGCTTTTCCCTTGGCTCGTGGCCTTGGAATCCCCACTTATTTCTTCACTTCCTTTTCTGCTGCTGCTCTCGCTGCCATCCTCTACTTGCCAACAATTCACAAACAGACCACCAAGAGCTTCAAAGATCTCCCCACCACTGTTTTTCACATTCCTGGATTGCCTCCACTGCTAGCTACTCACATGATAGAACCACTGCTTGACCGAGAAGACCCGACTTATCACCAATCGCTACAGTTCTCACTGGATCTACGAAAATGTGATGGGGTTTTGACCAATACGTTTGATGGCCTTGAGCCAATAGCCCTTATGGCTATTACAAATGGGGAATGCGTTACCGATGGACCAAGTCCGTCTGTTTATTGCATTGGACCATTGATTGCAGATTCTGGTGAAGATGCTCCAACTCATAAGCATGACTGCTTGTCATGGCTGGACCAGCAGCCGAGTAGGAGTGTTGTGTTCCTGTGTTTTGGCAGCCGTGGATCGTTCTCGAGGGAGCAGGTGAAGGAGATAGCTAATGGGTTGGAGAGAAGCGGCCAGAGATTTTTGTGGGTGGTGAAAATTCCACCTGTGGATAACAAAAGCAAGGAAATCAAGCAAGAAAATTTGGTGTGGAACGACTTTGATTTGGATGAGCTTATGCCAGAAGGGTTCTTGGAAAGAACCAAGAATAGGGGAATGGTGGTGAAGTCATGGGCGCCGCAGGTGGCGGTGCTGAGACACCAATCCGTGGGTGGGTTTGTGTCTCACGTGGGGTGGAACTCAGTGTTGGAAGCGGTGGTTGCGGGAGTGCCAATGGTGGCATGGCCTCTCCACGCCGAACAACACCTGAATAAGGCTGTTTTGGTCGAGAATATGAAGATGGCCATTGGTGTGGAGCAGAGAGATGGTGACAGGTTTGTGAGTGGGGCTGAGTTGGAGAGGCGACTCAAGGAGTTGATGGATTCTGAAGAGGGGAGAGAGCTGAGAGAGAGAAGCGAGAAGATGAGAGAGATGGCGGTGGAAGCTTGGAGAGAGGAGGGATCATCCACTACGGCCCTTGCCAAGTTGGCCGAGAACTGGAAGCATGATTAA 1548 0.4929 MSLHNPHHISISSLTSTSSADLILSSSQFQGSKVVPKMKDAIVLYPAPGIGHLLSMVELGKLILSRYNCEFSIIILLTTGPFDTPATTSHIDRISQTTSSISFHRFPYLPFTASPTLGRLANMFEFLSLNDSNVLQSLQQLSEASSIRAVILDSFCTSAFPLARGLGIPTYFFTSFSAAALAAILYLPTIHKQTTKSFKDLPTTVFHIPGLPPLLATHMIEPLLDREDPTYHQSLQFSLDLRKCDGVLTNTFDGLEPIALMAITNGECVTDGPSPSVYCIGPLIADSGEDAPTHKHDCLSWLDQQPSRSVVFLCFGSRGSFSREQVKEIANGLERSGQRFLWVVKIPPVDNKSKEIKQENLVWNDFDLDELMPEGFLERTKNRGMVVKSWAPQVAVLRHQSVGGFVSHVGWNSVLEAVVAGVPMVAWPLHAEQHLNKAVLVENMKMAIGVEQRDGDRFVSGAELERRLKELMDSEEGRELRERSEKMREMAVEAWREEGSSTTALAKLAENWKHD* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1856 515 CDD GT1_Gtf-like 42 512 IPR002213 GO:0008194
Vvi18g1856 515 PANTHER GLYCOSYLTRANSFERASE 42 514 - -
Vvi18g1856 515 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 291 475 IPR002213 GO:0008194
Vvi18g1856 515 FunFam Glycosyltransferase 296 496 - -
Vvi18g1856 515 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 42 512 - -
Vvi18g1856 515 Gene3D Glycogen Phosphorylase B; 42 502 - -
Vvi18g1856 515 Gene3D Glycogen Phosphorylase B; 295 496 - -
Vvi18g1856 515 FunFam Glycosyltransferase 42 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1856 Vvi-Chr18 25392826 25394373 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1856 39 512 Glycosyltransferase AT3G16520 46.667 4.48e-134 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1856 K22845 - vvi:100259577 954.896