Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi18g1855 | ATGCCAGAAGGGTTCTTGGAAAGAACCAATAATAGAGGAATGGTGGTGAAGTCATGGGCGCCGCAGGTGGCGGTGCTAAGACACCAATCCGTGGGTGGATTCGTGACTCATTGCGGGTGGAACTCAGTGTTGGAAGCGGTGTCTGTGGGAGTGCCAATGGTGGCATGGCCTCTCCACACCGAACAACACCTGAATAAGGTTGTTTTGGTCGAGAATATGAAGATGGCCATTGGTGTGGAGCAGAGAAATGGTGACAGGTTTGTGAGTGGGGCTGAGTTGGAGAGGTGA | 288 | 0.5243 | MPEGFLERTNNRGMVVKSWAPQVAVLRHQSVGGFVTHCGWNSVLEAVSVGVPMVAWPLHTEQHLNKVVLVENMKMAIGVEQRNGDRFVSGAELER* | 96 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi18g1855 | 95 | PANTHER | GLYCOSYLTRANSFERASE | 1 | 95 | - | - | |
| Vvi18g1855 | 95 | Pfam | UDP-glucoronosyl and UDP-glucosyl transferase | 14 | 69 | IPR002213 | GO:0008194 | |
| Vvi18g1855 | 95 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 1 | 94 | - | - | |
| Vvi18g1855 | 95 | ProSitePatterns | UDP-glycosyltransferases signature. | 19 | 62 | IPR035595 | - | |
| Vvi18g1855 | 95 | Gene3D | Glycogen Phosphorylase B; | 1 | 95 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi18g1855 | Vvi-Chr18 | 25380525 | 25380812 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vvi18g1855 | 1 | 95 | Glycosyltransferase | AT3G16520 | 63.542 | 4.49e-40 | 135 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi18g1855 | K22845 | - | vvi:100247819 | 183.726 |