Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1853 ATGGATGATGCAATAGTCCTGTATCCAGGTCCAGGCATCGGCCATGTGGTGTCCATGATAGAGCTAGGCAAGCTCATCCTTCGCCGTTACTCCCACAGATTCTCCATCATCATTCTCCTCTCTACTGGTCCTTTTGACACCCCGGCCACCACCTCTTACATTGACCACATCTCCCAAACCAATCCTTTCATCTCTTTCCACCGCTTCCCCTATCTATCGGTTGACACCTCTTCTTCCACTTGCAATATCGTCGCTGTCATCTCTGAGTTCTTCCGTCTCAGTGCCTCTAATGTCCTCCATGCTCTCCAGCAACTCTCCAAAACTTCCACCGTTCGGGCATTCATCATCGACTACTTTTGCGCTTCAGCTCTTCCTGTTGCTCGTGACCTTGGAATTCCCACTTACCACTTCCTCACCACCGGTGCTGCTGTTAATGCGGCTGTCCTTTACTTTCCGACAATTCACAAACAGTATGAGAGCAGCAATAAGAGCTTCAAGGACATGCCCACTACATTTTTACACTTTCCTGGGTTGCCTCCGCTACAAGCCACTCGAATGCTTGAACCATGGCTCAACCGAGACGACCCCGCCTATGATGATATGCTATACTTCTCAGAGCTTTTGCCAAAATCCGATGGACTTTTGATAAATACTTTCCATGATCTTGAGCCAATAGCCGTTAAGACAATCAGGGAGGGGACATGTGTTCCCAATGGGCCAACTCCGCCAGTTTACTGCATCGGCCCTTTGATTGCGGATACTGGTGAAGATGAAAGCAATATTGCTGGTAGTGTAGCTCGCCATGGTTGCTTGTCCTGGCTTGACACACAGCCAAGTCAGAGTGTTGTCTTCTTGTGCTTCGGGAGCAACGGAACGTTCTCGCCCGCTCAGGTGAAGGAGATAGCTAATGGACTGGAAAGAAGTGGCAAGAGATTCTTGTGGGTGTAA 948 0.4926 MDDAIVLYPGPGIGHVVSMIELGKLILRRYSHRFSIIILLSTGPFDTPATTSYIDHISQTNPFISFHRFPYLSVDTSSSTCNIVAVISEFFRLSASNVLHALQQLSKTSTVRAFIIDYFCASALPVARDLGIPTYHFLTTGAAVNAAVLYFPTIHKQYESSNKSFKDMPTTFLHFPGLPPLQATRMLEPWLNRDDPAYDDMLYFSELLPKSDGLLINTFHDLEPIAVKTIREGTCVPNGPTPPVYCIGPLIADTGEDESNIAGSVARHGCLSWLDTQPSQSVVFLCFGSNGTFSPAQVKEIANGLERSGKRFLWV* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1853 315 Gene3D Glycogen Phosphorylase B; 2 259 - -
Vvi18g1853 315 FunFam Glycosyltransferase 5 256 - -
Vvi18g1853 315 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 315 - -
Vvi18g1853 315 CDD GT1_Gtf-like 5 315 IPR002213 GO:0008194
Vvi18g1853 315 Gene3D Glycogen Phosphorylase B; 260 315 - -
Vvi18g1853 315 PANTHER GLYCOSYLTRANSFERASE 5 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1853 Vvi-Chr18 25352280 25354050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1853 2 315 Glycosyltransferase AT3G16520 43.987 2.27e-73 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1853 K22845 - vvi:100854186 643.654