Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1849 ATGGAGGATGCAATAGTCCTGTATCCAGCTCCAGGCATCGGTCATGTGGTGTCCATGATAGAGCTAGGCAAGCTCATCCTTCGTCGTTACTCCCACAGATTCTCCATCACCATTCTCCTCGCCCCCGGTCCTTTTGACACTCCGGCAACCACCTCTTACATTGACCACATCTCCCAAACCAATCCTTCCATCTCTTTCCACCGCTTTCCCTATCTCTCGGTTGACACCTCTTCTTCCACTCGCAGTCACTTCGCTGTCTTGTTTGAGTTCATCCGTCTCAGTGCCTCTAATGTCCTCCATTCCCTCCAGCAACTCTCCAGAGTTTCCACCATTCGGGCATTCATCATTGACTACTTTTGCGCTTCAGCTCTTCCTGCGGGTCGTGGCCTTGGAATTCCCACTTACTACTTCCTCACCTCCGGTGCTGCTTCTATTGCTGCCGTCCTCTACTTTCCGACAATTCACAAACAGACTGAGATCAGCAATAAGAGCTTCAAGGACATGCCCACTACCTTTATACACTTTCCTGGGTTGCCTCCGCTACAAGCCACTCGAATGCTTCAACCATTGCTCAACCGAGACGACCCCGCCTATGATGATATGCTATACTTCTCAGAGCTTTTTCCCAAATCCGATGGACTTGTGATAAATTCATTCGATGACCTTGAGCCGATAGCCCTTAAGACAATCAGAGAGGGGACATGTGTTCCCAATGGGCCAACTCCGTCAGTTTACTGCATCGGCCCTTTGATTGCTGATACTGGTGAAGATGAAAGCAATATTTCTGGTAATAAAACTCGTCATGGTTGCTTGTCCTGGCTTGACACACAGCCAAGTCAGAGTGTTGTCTTCTTGTGCTTCGGGAGCAAGGGAACGTTCTCTCCCGCTCAGATGAAGGAGATAGCTAATGGACTGGAAAGAAGTGGCAAGAGATTCTTGTGGGTGGTGAAGAACCCACCAACCACCGACAAAAGCAAGCGGATTGCAGTGACGGCCGATGTTGATTTGAATGTTCTAATGCCAGAGGGGTTCCTGGAAAGAACCAAGGATAGGGGAATGGTGGTGAAGTCATGGGCGCCGCAGGTGGCGGTGCTGAATCACCCATCGGTGGGGGGATTTGTAACCCATTGCGGGTGGAACTCGGTGTTGGAGGCAGTGGTTGCAGGGGTGCCAATGGTGGCCTGGCCTCTATATGCTGAGCAGCATCTGAATAAGGCAGCTCTGGTGGAGGTTATGAAGATGGCTATTGGAGTGGAGCAGAGGGATGAGGATATGTTTGTGAGTGGAGCTGAGGTGGAGAGGAGAGTGAGAGAGTTGACGGAGTGTGAAGAGGGGAGGGAGAGAGAAAGAAGCAGGAAGATGAGAGAGATGGCTTTGGCAGCTTGGAAAGAGGGGGTTCATCCACCACTGCCCTTGCCAAATTGGCTGATATCTGGAGTCAAGATTGATTGGAATGTATCTGAATCTAGCTTGCTTTTATCTTTGTAA 1488 0.502 MEDAIVLYPAPGIGHVVSMIELGKLILRRYSHRFSITILLAPGPFDTPATTSYIDHISQTNPSISFHRFPYLSVDTSSSTRSHFAVLFEFIRLSASNVLHSLQQLSRVSTIRAFIIDYFCASALPAGRGLGIPTYYFLTSGAASIAAVLYFPTIHKQTEISNKSFKDMPTTFIHFPGLPPLQATRMLQPLLNRDDPAYDDMLYFSELFPKSDGLVINSFDDLEPIALKTIREGTCVPNGPTPSVYCIGPLIADTGEDESNISGNKTRHGCLSWLDTQPSQSVVFLCFGSKGTFSPAQMKEIANGLERSGKRFLWVVKNPPTTDKSKRIAVTADVDLNVLMPEGFLERTKDRGMVVKSWAPQVAVLNHPSVGGFVTHCGWNSVLEAVVAGVPMVAWPLYAEQHLNKAALVEVMKMAIGVEQRDEDMFVSGAEVERRVRELTECEEGRERERSRKMREMALAAWKEGVHPPLPLPNWLISGVKIDWNVSESSLLLSL* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1849 495 PANTHER GLYCOSYLTRANSFERASE 5 462 - -
Vvi18g1849 495 FunFam Glycosyltransferase 5 256 - -
Vvi18g1849 495 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 465 - -
Vvi18g1849 495 Gene3D Glycogen Phosphorylase B; 268 463 - -
Vvi18g1849 495 CDD GT1_Gtf-like 5 439 IPR002213 GO:0008194
Vvi18g1849 495 Gene3D Glycogen Phosphorylase B; 5 465 - -
Vvi18g1849 495 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 265 410 IPR002213 GO:0008194
Vvi18g1849 495 ProSitePatterns UDP-glycosyltransferases signature. 358 401 IPR035595 -
Vvi18g1849 495 FunFam Glycosyltransferase 268 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1849 Vvi-Chr18 25326336 25327823 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1849 2 464 Glycosyltransferase AT3G16520 49.356 1.43e-139 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1849 K22845 - vvi:100264736 910.598