Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1848 ATGGAGGATGCAATAGTCCTGTATCCAGCTCCAGGCATCGGCCATGTGGTGTCCATGATAGAGCTAGGCAAGCTCATCCTTCGTCGTTGCTCCCATAGATTCTCCATCACCATTCTCCTTGCCCCCGGCCCTTTTGACACTCCGGCCACCACCTCTTACATTGACCACATCTCCCAAACCAATCCGTCCATCTCTTTCCACCGCTTTCCCTATCTCTCGGTCGACACCTCTTCTTCCACTCGCAGTCACTTCGCTGTCTTGTTTGAGTTCATCCGTCTCAGTGCCTCTAATGTCCTCCATTCCCTCCAGCAACTCTCCAGAGCTTCCACCATTCGGGCATTCATCATCGACTACTTTTGCGCTTCAGCTCTTCCTGCGGGTCGTGGCCTTGGAATTCCCACTTACTACTTCCTCACCTCCGGTGCTGCTTCTGTTGCTGCCGTCCTCTACTTTCCGACAATTCACAAACAGACTGAGAGCAGCAATAAGAGCTTCAAGGACATGCCCACTACCTTTATACACTTTCCTGGGTTGCCTCCGCTACAAGCCACTCGAATGCCTCAACCATTGCTCAACCGAGACGACCCCGCCTATGATGATATGCTATACTTCTCAGAGCTTTTGCCCAAATCCGATGGACTTGTGATAAATACATTCGATGACCTTGAGCCGATAGCCCTTAAGACAATCAGAGAGGGGACATGTGTTCCCAATGGGCCAACTCCGTCAGTTTACTGCATCGGCCCTTTGATTGCTGATACTGGTGAAGATGAAAGCAATATTGCTGGTAATAAAGCTCGTCATGGTTGTTTGTCCTGGCTTGACACACAGCCAAGTCAGAGTGTTGTCTTCTTCAAGCCGATTGCAGTGACGGCCGATGTTGATTTGAATGTTCTAATGCCAGAGGGGTTCCTGGAAAGAACCAAGGATAGGGGAATGGTGGTGAAGTCATGGGCGCCGCAGGTGGCGGAGCTGAATCACCCATCGGTGGGAGGATTTGTAACCCATTGCGGGTGGAACTCAGTGTTGGAGGCAGTGATTGCAGGGGTGCCAATGGTGGCCTGGCCTCTATATGCTGAGCAGCATCTGAATAAGGCAGCTCTGGTGGAGGTTATGAAGATGGCTATTGGAGTGGAGCAGAGGGATGAGGATATGTTTGTGAGTGGAGCTGAGGTGGAGAGGAGAGTGAGGGAGTTGATGGAGTGTGAGGAGGGGAGGGAGCTGAGGGAAAGAAGCAGGAAGATGAGAGAGATGGCTTTGGCAGCTTGGAAAGATGGGGGTTCATCCACCACTGCCCTCGCCAAATTTGCTGATGTCTGGAATCAAGATTGA 1332 0.5143 MEDAIVLYPAPGIGHVVSMIELGKLILRRCSHRFSITILLAPGPFDTPATTSYIDHISQTNPSISFHRFPYLSVDTSSSTRSHFAVLFEFIRLSASNVLHSLQQLSRASTIRAFIIDYFCASALPAGRGLGIPTYYFLTSGAASVAAVLYFPTIHKQTESSNKSFKDMPTTFIHFPGLPPLQATRMPQPLLNRDDPAYDDMLYFSELLPKSDGLVINTFDDLEPIALKTIREGTCVPNGPTPSVYCIGPLIADTGEDESNIAGNKARHGCLSWLDTQPSQSVVFFKPIAVTADVDLNVLMPEGFLERTKDRGMVVKSWAPQVAELNHPSVGGFVTHCGWNSVLEAVIAGVPMVAWPLYAEQHLNKAALVEVMKMAIGVEQRDEDMFVSGAEVERRVRELMECEEGRELRERSRKMREMALAAWKDGGSSTTALAKFADVWNQD* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1848 443 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 440 - -
Vvi18g1848 443 FunFam Glycosyltransferase 295 424 - -
Vvi18g1848 443 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 312 370 IPR002213 GO:0008194
Vvi18g1848 443 CDD GT1_Gtf-like 5 422 IPR002213 GO:0008194
Vvi18g1848 443 Gene3D Glycogen Phosphorylase B; 292 424 - -
Vvi18g1848 443 Gene3D Glycogen Phosphorylase B; 2 277 - -
Vvi18g1848 443 PANTHER GLYCOSYLTRANSFERASE 5 284 - -
Vvi18g1848 443 FunFam Glycosyltransferase 5 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1848 Vvi-Chr18 25313263 25314864 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1848 2 441 Glycosyltransferase AT3G16520 44.748 9.02e-121 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1848 K22845 - vvi:100254461 872.078