Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1847 ATGAATGAATTTTCAAAGGAGCAGATGGGCACGTTGTCGCCATCTACCATCATGTCGCTCCACAATCCACATCATATATGTATATCATCTCTAACATCGACTTCATCTGCAGATCTCATTCTTAGTTCCTCCCAATTCCAAGAATCCAAGCTGGTACCAAAAATGAAGGATGCCATAGTCCTTTACCCAGCTCCAGGGATTGGCCACTTGTTGTCCATGGTAGAGCTTGGTAAGCTCATTCTTAGCCGCTACAACTGCGAATTCTCCATTATTATTCTCCTCACAACTGGCCCTTTTGACACTCCAGCCACCACCTCTCACATCGATCGAATCTCCCAAACCACCTCTTCCATCTCCTTCCACCGCTTCCCTTATCTCCCATTCACCGCATCTCCAACTCTTGGTCGCCTGGCCAACATGTTCGAGTTCCTGAGTCTCAATGATTCTAATGTTCTCCAATCTCTTCAGCAGCTCTCGGAAGCTTCTTCCATTCGGGCTGTTATACTCGACTCTTTTTGCACTTCAGCTTTTCCCTTGGCTCGTGGCCTTGGAATTCCCACTTATTTCTTCACTTCCTTTTCTGCTGCTGCTCTCGCTGCCATCCTCTACTTGCCAACAATCCACAAACAGACCACCAAGAGCTTCAAAGATCTCCCCACCACTGTTTTTCACATTCCTGGATTGCCTCCACTGCTAGCTACTCACATGATAGAACCACTGCTTGACCGAGAGGACCGGACTTATCACCAGTCGCTACAGTTCTCACTGGATCTACGAAAATGTGATGGGGTTTTGACCAATACTTTTGATGGCCTTGAGCCAATAGCCCTTATGGCTATTACAAATGGGGAATGCGTTACCGATGGACCAAGTCCGTCTGTTTATTGCATTGGACCATTGATTGCAGATGCTGGTGAAGATGCTCCAACTCATAAGCATGACTGCTTGTCATGGCTGGACCAGCAGCCGAGTAGGAGTGTTGTGTTCCTGTGTTTTGGCAGCCGTGGATCGTTCTCGAGGGAGCAGGTGAAGGAGATAGCTAATGGGTTGGAGAGAAGCGGCCAGAGATTTTTGTGGGTGGTGAAAATTCCACCTGTGGATAACAAAAGCAAGGAAATCAAGGAAGAAAATTTGGTGTGGAACGACTTTGATTTGGATGAGCTTATGCCAGAAGGGTTCTTGGAAAGAACCAATAATAGGGGAATGGTGGTGAAGTCATGGGCGCCGCAGGTGGCGGTGCTGAGACACCAATCCGTGGGTGGGTTTGTGTCTCACGTGGGGTGGAACTCAGTGTTGGAAGCGGTGGTTGCGGGAGTGCCAATGGTGGCATGGCCTCTCCACGCCGAACAACACCTGAATAAGGCTGTTTTGGTCGAGAATATGAAGATGGCCATTGGTGTGGAGCAGAGAGATGGTGACAGGTTTGTGAGTGGGGCTGAGTTGGAGAGGCGACTCAAAGAGTTGATGGATTCTGAAGAGGGGAGAGAGCTGAGAGAGAGAAGCGAGAAGATAAGAGAGATGGCGGTGGAAGCTTGGAGAGAGGAGGGATCATCCACTACGGCCCTTGCCAAGTTGGCCGAGATCTGGAAGCATGATTAA 1599 0.4897 MNEFSKEQMGTLSPSTIMSLHNPHHICISSLTSTSSADLILSSSQFQESKLVPKMKDAIVLYPAPGIGHLLSMVELGKLILSRYNCEFSIIILLTTGPFDTPATTSHIDRISQTTSSISFHRFPYLPFTASPTLGRLANMFEFLSLNDSNVLQSLQQLSEASSIRAVILDSFCTSAFPLARGLGIPTYFFTSFSAAALAAILYLPTIHKQTTKSFKDLPTTVFHIPGLPPLLATHMIEPLLDREDRTYHQSLQFSLDLRKCDGVLTNTFDGLEPIALMAITNGECVTDGPSPSVYCIGPLIADAGEDAPTHKHDCLSWLDQQPSRSVVFLCFGSRGSFSREQVKEIANGLERSGQRFLWVVKIPPVDNKSKEIKEENLVWNDFDLDELMPEGFLERTNNRGMVVKSWAPQVAVLRHQSVGGFVSHVGWNSVLEAVVAGVPMVAWPLHAEQHLNKAVLVENMKMAIGVEQRDGDRFVSGAELERRLKELMDSEEGRELRERSEKIREMAVEAWREEGSSTTALAKLAEIWKHD* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1847 532 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 530 - -
Vvi18g1847 532 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 160 492 IPR002213 GO:0008194
Vvi18g1847 532 PANTHER GLYCOSYLTRANSFERASE 59 531 - -
Vvi18g1847 532 CDD GT1_Gtf-like 59 508 IPR002213 GO:0008194
Vvi18g1847 532 Gene3D Glycogen Phosphorylase B; 59 519 - -
Vvi18g1847 532 Gene3D Glycogen Phosphorylase B; 312 513 - -
Vvi18g1847 532 FunFam Glycosyltransferase 313 513 - -
Vvi18g1847 532 FunFam Glycosyltransferase 59 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1847 Vvi-Chr18 25305917 25307515 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1847 56 529 Glycosyltransferase AT3G16520 46.458 5.43e-133 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1847 K22845 - vvi:100259577 984.941