Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1846 ATGAAGGATGCAATAGTCCTTTACCCCGCTCCAGGCATTGGCCACTTGGTGTCCATGGTAGAGCTTGGTAAGCTCATTCTTAGCCGCTATGACTGCGAATTCTCCATTATCGTTCTCCTCACAACTGGCCCTTTTGACTCTCCGGCCACCACCTCTTACATCGATCGAATCTCCCAAACCACCTCTTCCATCTCCTTCCACCGCTTCCCTTATCTCCCATTCACCGCATCTCCAACTCTTAGTCGCCTGGCCAACATGTTCGAGTTCCTGAGTCTCAATGATTATAATGTTCCCCAATCTCTCCAGCAGCTCTCTGAAGCTTCTTCCATTCGGGCTGTTATACTTGACTCTTTCTGCACTTCAGCTTTTCCCTTGGCTCGTGGCCTTGGAATTCCCACTTATTTCTTCACTGCTTTTTCTGCTGCTGCTCTCGCTGCCATCCTCTACTTGCCAACAATTCACAAACAGACCACCAAGAGCTTCAAAGATCTCCCCACCACTGTTTTTCACATTCCTGGATTGCCTCCACTGCTAGCTACTCACATGATAGAACCACTGCTCGACCGAGAGGACCGGAGTTATCACCAATCGCTACAGTTCTCACTGGATCTACGAAAATGTGATGGGGTTTTGACCAATACGTTTGATGGCCTTGAGCCAGTAGCCCTTATGGCTATTACAAATGGGGAATGCGTTACCGATGGACCAAGTCCATCTGTTTATTGCATTGGACCGTTGATTGCAGATGCTGGTGAAGATGCTCCAACTCATAAGCATGACTGCTTGTCATGGCTGGACCAGCAGCCGAGTAGGAGTGTTGTGTTCCTGTGTTTTGGGAGCCGTGGATCGTTCTCTAGGGAGCAGGTGAAGGAGATAGCTAATGGGTTGGAGAGAAGCGGGGAGAGATTTCTGTGGGCTGTGAAGAGTCCACCAGCGGATGAAAAAAGGAAGGAAATCAGAGATGAAATTGTGGTGTGGGACGATTTCGATTTGGACGATATCATGCCAGAAGGCTTTTTGGATAGAACCAAGGATAGGGGAATGGTGGTGAAGTCGTGGGTGCCACAAGTGGCAGTGCTCAGACACCAATCAGTGGGTGGATTCGTGACTCATTGCGGGTGGAACTCGGTGTTGGAAGCGGTGTCTGCGGGAGTGCCAATGGTGGCATGGCCTCTCCACGCCGAACAACACCTGAATAAGGCTGTTTTGGTCGAGAATATGAAGATGGCCATTGGTGTGGAGCAGAGAGATGGTGACAGGTTTGTGAGTGGGGCTGAGTTGGAGAGGCGACTCAAAGGGTTGATGGATTCTGAAGAGGGGAGAGATCTGAGAGAGAGAATTAATAAGACCAGAGAGATGGCGGTGGAAGCTTGGAGAGAGGAGGGCTCATCCACTACTGCCCTTGCCAAGTTGGCCGACATCTGGAAGCATGATCAAGGATGCAAGTTGGCCGATTGA 1458 0.5014 MKDAIVLYPAPGIGHLVSMVELGKLILSRYDCEFSIIVLLTTGPFDSPATTSYIDRISQTTSSISFHRFPYLPFTASPTLSRLANMFEFLSLNDYNVPQSLQQLSEASSIRAVILDSFCTSAFPLARGLGIPTYFFTAFSAAALAAILYLPTIHKQTTKSFKDLPTTVFHIPGLPPLLATHMIEPLLDREDRSYHQSLQFSLDLRKCDGVLTNTFDGLEPVALMAITNGECVTDGPSPSVYCIGPLIADAGEDAPTHKHDCLSWLDQQPSRSVVFLCFGSRGSFSREQVKEIANGLERSGERFLWAVKSPPADEKRKEIRDEIVVWDDFDLDDIMPEGFLDRTKDRGMVVKSWVPQVAVLRHQSVGGFVTHCGWNSVLEAVSAGVPMVAWPLHAEQHLNKAVLVENMKMAIGVEQRDGDRFVSGAELERRLKGLMDSEEGRDLRERINKTREMAVEAWREEGSSTTALAKLADIWKHDQGCKLAD* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1846 485 FunFam Glycosyltransferase 5 252 - -
Vvi18g1846 485 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 477 - -
Vvi18g1846 485 Gene3D Glycogen Phosphorylase B; 5 465 - -
Vvi18g1846 485 PANTHER GLYCOSYLTRANSFERASE 5 477 - -
Vvi18g1846 485 ProSitePatterns UDP-glycosyltransferases signature. 353 396 IPR035595 -
Vvi18g1846 485 FunFam Glycosyltransferase 259 459 - -
Vvi18g1846 485 CDD GT1_Gtf-like 5 454 IPR002213 GO:0008194
Vvi18g1846 485 Gene3D Glycogen Phosphorylase B; 258 459 - -
Vvi18g1846 485 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 106 405 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1846 Vvi-Chr18 25300595 25302052 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1846 2 475 Glycosyltransferase AT3G16520 46.250 2.53e-133 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1846 K22845 - vvi:100247819 962.985