Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1843 ATGGAAGGCAAGATAGTCATATTCCCAGCCGCCGGCCTGAGCCATTTGGTGCCCATGGTGGAGCTAGCAAAGCTCATCCTTCATCGCCATCCCCTCAGATTCTCCGTCACTGTTCTCCTCCCATATGGCCCTTTTGCCACCCCGGCCGCCTCTTCCTACATCCACCGCCTCTCCCAAACTAACCCCTCCATCGCCTTCCACCACTTTTCTCACCCATCCGATGATACCTCCACCATTCACAGGAGCAGAGAAGCTGCCTTATTCCAATTTCTTCATATCAGCGCTGCCCATGTCGTGGATTATCTGCAGCAACCCACCAAAGCCACCGGTATTTGTGCCCTTATCGGCCAATTCTTTACCACTTCACTCCTGGAAGCTGCGCGTGAGCTTGGAATTCCCACCTACCACTTCTTTACTTCCGGCGCTGCGGCCCTTGCTTTCTTCCTCCACTTCCCAACTATTCATGACCGGACCACCGAGAGCTTCAAAGACCTTCCCACCGAGGTTTTTGGCTTCCCAGGCCTGCCTCCTCTGAAAGCAACTCACATGCCTGAACTTGTACTTGACCGAGATGAGGCGGGCTATCATGGGATGCTGTACTTCTCACAACATCTACCGGAATCTAATGGGATTATCGCTAACACGTTTGAAGAGTTCGAGCCCAAAGCCACTCAGGCCATTGAGGATGGCACATGCCTTTTGAATAGGCCTACTCCTCCAATTTACTACATGGGACCATTGATAGGTGAAGCCTGTGAAGGCGAAGGCCATGCTGTTACTGCAGATCAGCATTGTTCCTTGACATGGCTGGACACGCAGCCAACTAGGAGTGTGGTGTTCTTATGCTTTGGAAGCCGCGGAACGTTCTTGAGGGAGCAGATAAAGGAGATAGCTAAAGGATTGGAGAATAGTGGGCAAAGGTTTTTGTGGGTGGTGAAAAATCCCAAGGAGGGAAAAGGCAAGAAAATTGAGGAGAGCACGGATGTCGATCTGGAAGCACTATTGCCGGAAGAGTTCTTGGAGAGAACCAGAGACAGAGGATTGGTGGTGAAGGCATGGGCACCACAAGTGGCAGTGCTGAATCATCCTTCACTGGGAGGATTCGTAACGCACTGCGGGTGGAACTCGGTGTTGGAAGCAGTGGTGGCCGGCGTGCCGATGGTGGCATGGCCTCTGTATGCAGAGCAGCAACTGAACAAGGCTGTTCTGGTGGAGGATATGAAGATGGCAATTGGAATGGAGGAGAGCAATGAGGATGGGTTTGTAAGTGGCGAAGAGGTGGAGAAGAGAGTGAGAGAGTTGATGGAGGGTGAAGAGGGGAGGGAACTGAGAGAAAGAAGCAGGAAGAAGAGAGAGATGGCTTTGGCAGCTTGGAGAGAGAAAGGTTCCTCCACCACGGCTCTTGCCAAGTTGCTTGACATCTGGGCACATGGCGGTGTTTAA 1443 0.5218 MEGKIVIFPAAGLSHLVPMVELAKLILHRHPLRFSVTVLLPYGPFATPAASSYIHRLSQTNPSIAFHHFSHPSDDTSTIHRSREAALFQFLHISAAHVVDYLQQPTKATGICALIGQFFTTSLLEAARELGIPTYHFFTSGAAALAFFLHFPTIHDRTTESFKDLPTEVFGFPGLPPLKATHMPELVLDRDEAGYHGMLYFSQHLPESNGIIANTFEEFEPKATQAIEDGTCLLNRPTPPIYYMGPLIGEACEGEGHAVTADQHCSLTWLDTQPTRSVVFLCFGSRGTFLREQIKEIAKGLENSGQRFLWVVKNPKEGKGKKIEESTDVDLEALLPEEFLERTRDRGLVVKAWAPQVAVLNHPSLGGFVTHCGWNSVLEAVVAGVPMVAWPLYAEQQLNKAVLVEDMKMAIGMEESNEDGFVSGEEVEKRVRELMEGEEGRELRERSRKKREMALAAWREKGSSTTALAKLLDIWAHGGV* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1843 480 FunFam Glycosyltransferase 264 459 - -
Vvi18g1843 480 CDD GT1_Gtf-like 4 435 IPR002213 GO:0008194
Vvi18g1843 480 FunFam Glycosyltransferase 5 252 - -
Vvi18g1843 480 Gene3D Glycogen Phosphorylase B; 263 459 - -
Vvi18g1843 480 PANTHER GLYCOSYLTRANSFERASE 4 476 - -
Vvi18g1843 480 ProSitePatterns UDP-glycosyltransferases signature. 353 396 IPR035595 -
Vvi18g1843 480 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 112 436 IPR002213 GO:0008194
Vvi18g1843 480 Gene3D Glycogen Phosphorylase B; 5 464 - -
Vvi18g1843 480 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1843 Vvi-Chr18 25261347 25262789 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1843 2 476 Glycosyltransferase AT3G16520 46.985 1.93e-132 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1843 K22845 - vvi:100264754 949.118