Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1840 ATGAAGGACACAATACTCCTGTTCCCAGCCACCGGCATGGGTCATCTTGTATCCATGGTGGAGCTGGGCAAGCTCATCCTCCACCAGTACGGCCACCAATTCTCCATCACTATTCTACTCATCAATGGTCCTTTCGACCCCCCGGCCATCACCTCTTACGTTAACGCCATCTCCCAAACCCACCCCTCCATTACCTTTCACACTTTGCCTCAACGCTCCGTCGACACGGCCCCCACTCGCAGCCGCGCTGCCATTGCTTTCGAATTCCTAAGCCTCTACGGTTCGGATTTCTTCGACTATCTGAAGCACCTCCCTGATTCCTCCAAGCCTCGCGCTATCGTTATCGACTACTTCTGCGCTTCTGCTCTTCCAGTGGCGCGTGAGTTTGGCATACCGGTTTTCCATTTCTTCACCTCCGGTGCGGCCGTTCTTGGTGCGTACCTGTACTTGCCGACGATGCACGAAGAGATCAACACCACCCAGAGTTTCAAGGACCTCCCCGACACTCTGCTTCGTTTTCCTGGGTTTCCTCTGCTGCCAGCGACTCAAATGCCTGAGCCCTTGCTTGATAGAAATGACCCGGCTTATGACTACATAATTTACTTCTCCGAACACCTCCGGAAATCCGATGGTCTTTTGGTCAATACTTTTGAAGCGCTTGAGCCAAATGCGCTTCAAGTCCTTGCAGATGGGTCGTGCGTCCCCAAAGGCACAACTCCGCCGGTTTACTGCGTCGGACCGCTGATAGCCAATCCAGATGAAGGTGAAAGTCAGCACGCTTGCTTGACATGGCTGGACTCGCAGCCAAGCAAGAGCGTGGTGTTCTTATGCTTCGGCAGCCGCGGATCCTTCTCGGCGGAGCAAGTGAAGGAGATTGCCAAAGGATTGGAGAACAGCGGACAGAGGTTCTTGTGGGTGGTGAAGAATCCACCAAAAGACAACAGCAAGCAGAGTGAAGAAGCCGATGAGATAGACTTGGAATGTTTGATGCCAGAAGGGTTCTTGGAGAGAACCAGAGAGAGGGGGATGGTGGTGAAGTTATGGGCACCGCAGGTGGCAGTGCTGAAGCACCCATCAGTGGGCGGGTTCGTGACGCACTGCGGGTGGAACTCGGTGTTGGAGGCGGTGGTGAGGGGAGTGCCGATGGTGGCGTGGCCTCTGTATGCGGAGCAGCATATGAATAGGGCATTGTTGGTGGGGGTGATGAAGATGGCAATAGCGGTGGAGGAGAGAGACGAAGATCGGTTAGTGACCGGAGAAGAGGTGGAGAGAAGTGTCAGAGAGTTGATGGATACTGAAGTAGGAAGAGAGCTGAGGGAGAGAAGCAGGAAGCTGAGAGAGATGGCGGAGGAAGCTTTGGGGCCACGTGGCACCTCAGCCGCCGCTCTTGCGAAGCTAGCAAAGTTATGGTCATGGTCAAGTCAAGGATGA 1431 0.5437 MKDTILLFPATGMGHLVSMVELGKLILHQYGHQFSITILLINGPFDPPAITSYVNAISQTHPSITFHTLPQRSVDTAPTRSRAAIAFEFLSLYGSDFFDYLKHLPDSSKPRAIVIDYFCASALPVAREFGIPVFHFFTSGAAVLGAYLYLPTMHEEINTTQSFKDLPDTLLRFPGFPLLPATQMPEPLLDRNDPAYDYIIYFSEHLRKSDGLLVNTFEALEPNALQVLADGSCVPKGTTPPVYCVGPLIANPDEGESQHACLTWLDSQPSKSVVFLCFGSRGSFSAEQVKEIAKGLENSGQRFLWVVKNPPKDNSKQSEEADEIDLECLMPEGFLERTRERGMVVKLWAPQVAVLKHPSVGGFVTHCGWNSVLEAVVRGVPMVAWPLYAEQHMNRALLVGVMKMAIAVEERDEDRLVTGEEVERSVRELMDTEVGRELRERSRKLREMAEEALGPRGTSAAALAKLAKLWSWSSQG* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1840 476 Gene3D Glycogen Phosphorylase B; 259 454 - -
Vvi18g1840 476 PANTHER GLYCOSYLTRANSFERASE 4 470 - -
Vvi18g1840 476 Gene3D Glycogen Phosphorylase B; 5 459 - -
Vvi18g1840 476 ProSitePatterns UDP-glycosyltransferases signature. 348 391 IPR035595 -
Vvi18g1840 476 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 235 433 IPR002213 GO:0008194
Vvi18g1840 476 FunFam Glycosyltransferase 259 454 - -
Vvi18g1840 476 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 468 - -
Vvi18g1840 476 CDD GT1_Gtf-like 5 452 IPR002213 GO:0008194
Vvi18g1840 476 FunFam Glycosyltransferase 5 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1840 Vvi-Chr18 25251260 25252690 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1840 2 471 Glycosyltransferase AT3G16520 45.493 5.33e-133 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1840 K22845 - vvi:100247599 951.044