Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1834 ATGTTACAAGTAATCCTCTTCTTTTTTGCTCTGTATCTGGCAGCTGTTGGGCAAGGTGGGCACAAGCCCTGTGTCCAAGCTTTTGGAGCTGATCAATTTGATGGGCAAAATCCAGAGGAGAGCAAAGCCAAAAGCTCATTCTTCAACTGGTGGTACTTTTGTATGAATGGTGGTATTTTAATAAGTTCCTCCATCTTGAGCTACATCCAAGACAGTCTCAATTGGGGTCTTGGATTCGGAATCCCCTGCACTGCAATGGTGGGTGCACTGTTTGTTTTCTTGCTCAGTACCAAGACTTATCGTTATAGTGTTAAAGGGAATGAGAAGAGCCCATTTGTGAGAATCAGTCAGGTGTTTGTTGCAGCAATCAAGAATTGGCATACAACAGATTCTTCTTTAACTGATGAAGAGGTAGCTTGTGGAACTCGGCCTCGTCAATGTTCTCACAAGTTCAAGTTTCTCAACAAGGCCTTGCTTGCACCAGGTAGTTCAAAGGAAGATGGAAAAGTGTGTAGTGTGAGTGATGTCGAAGAAGCAAAATCAGTTCTGAGGCTGTTTCCCATCTGGGCTTCCTGCTTGGTATTTGCTATTTTGATTGCTCAGCCACCAACTTTCTTTACCAAGCAAGGAGTTACCATGGATAGATCATTTGGTTCAGGCTTTAAGGTACCGGCTGCCTCACTTCAATGCTTCATCAGCTTCTCCATCCTTCTCTTTGTCCCCATATATGACCGCATTTTGGTTCCTATAGCAAGAGTTTTAACCAGAAAACCCTCTGGCATAACAATGCTTCAGAGGATTGGAACTGGGATGTTTTTGTCTATCATTGCCATGGTATTTGCAGCACTAGTTGAGGTCCAACGGCTCAAAACTGCCGAACAATACGGGCTGGTTGATATGCCAAATGCGACCATTCCAATGGCGGTGTGGTGGTTGATTCCCCAATATGTGATATTTGGAGTTGCTCAAGTATTCACCATGGTTGGTCTTCAAGAGTTCTTCTATGATGAGGTCCCAAATGAACTAAGGAGTGTTGGTCTCTCCCTCTACCTCAGTATCTTTGGTGTAGGGAGCTTTCTGAGCAGCTTTCTCATCTCTGTTATCAATAAAACTACTGGTGGGGATGGCCAAACTAGCTGGTTCAATGATAATCTTAACCAGGCTCATCTTGATTACTTCTATTGGCTACTTGCTGGGCTGAGTACAGTAGGATTTTCCACCTACTTGTATTCTGCAAGATCTTACATTTATAATAGTACTAGTACAGCATGA 1272 0.434 MLQVILFFFALYLAAVGQGGHKPCVQAFGADQFDGQNPEESKAKSSFFNWWYFCMNGGILISSSILSYIQDSLNWGLGFGIPCTAMVGALFVFLLSTKTYRYSVKGNEKSPFVRISQVFVAAIKNWHTTDSSLTDEEVACGTRPRQCSHKFKFLNKALLAPGSSKEDGKVCSVSDVEEAKSVLRLFPIWASCLVFAILIAQPPTFFTKQGVTMDRSFGSGFKVPAASLQCFISFSILLFVPIYDRILVPIARVLTRKPSGITMLQRIGTGMFLSIIAMVFAALVEVQRLKTAEQYGLVDMPNATIPMAVWWLIPQYVIFGVAQVFTMVGLQEFFYDEVPNELRSVGLSLYLSIFGVGSFLSSFLISVINKTTGGDGQTSWFNDNLNQAHLDYFYWLLAGLSTVGFSTYLYSARSYIYNSTSTA* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1834 423 Pfam POT family 3 380 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vvi18g1834 423 Gene3D MFS general substrate transporter like domains 1 422 IPR036259 -
Vvi18g1834 423 SUPERFAMILY MFS general substrate transporter 5 412 IPR036259 -
Vvi18g1834 423 FunFam POT family protein 1 422 - -
Vvi18g1834 423 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 3 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1834 Vvi-Chr18 25163342 25164841 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1834 3 423 Organic Solute Cotransporters AT1G22540 64.133 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1834 K14638 - vvi:100266627 840.106