Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1830 ATGGCTACTGCTAACGTGAATACATGGGGTGGGACGACGACCTTGCTACCTCTTTTAGGAGCTTCTGTTGCAGATTCTTACCTTGGTCAATATCGCACCATTGTTCTTGCTTTTCTTCTCTACATCCTGGGGCTGAGCTTGTTAACTTTATCTGCTATGCTTCCTTCCCTCATCGCCTACCAAAGCCAAAACGTGGACTACTTCACATCATATTCTCCTCCTCAACTCCAGATAATATTGTTCTTTTTCTCTCTATACTTAGTAGCAGTTGGGCAAGGGGGTCATAAGCCTTGCACACAGGCTTTTGGAGCTAATCAGTTTGATGGACAAAATCTAGAGGAGTGCAAATCCAAAAGATCATTCTTCAACTGGTGGCTTTTTGGTGTATCTACTGGTACTTCAGTAACTTATTTGATTGTCAGCTACATTGAAGACAACTTTAATTGGGGTCTTGGATTTGGAATTCCCTACATTGTCATGGTTGCAGCCCTGCTTGTTTTCTTGCTTGGAACTAGAACTTATTGGTTTACAATCAAAGGAAATGGGGAAAGCCCATTTGTGAGAATTGGAAAAGTATTTGTTGAAGCCAGACCTTGA 597 0.4188 MATANVNTWGGTTTLLPLLGASVADSYLGQYRTIVLAFLLYILGLSLLTLSAMLPSLIAYQSQNVDYFTSYSPPQLQIILFFFSLYLVAVGQGGHKPCTQAFGANQFDGQNLEECKSKRSFFNWWLFGVSTGTSVTYLIVSYIEDNFNWGLGFGIPYIVMVAALLVFLLGTRTYWFTIKGNGESPFVRIGKVFVEARP* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1830 198 SUPERFAMILY MFS general substrate transporter 12 176 IPR036259 -
Vvi18g1830 198 Gene3D MFS general substrate transporter like domains 1 197 IPR036259 -
Vvi18g1830 198 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 2 196 - -
Vvi18g1830 198 Pfam POT family 31 193 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1830 Vvi-Chr18 25092653 25094516 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1830 9 196 Organic Solute Cotransporters AT1G22540 59.043 5.95e-67 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1830 K14638 - vvi:104882760 335.88