Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1822 ATGGATGCCGTCGACCACAGAGGCCTTCCGGCCAAGCGATCCACCTCGGGTGGTTGGAGATCCACATATTTCATCATAGGTACTGAAGTGGCGAAGAGATCCGCCTACTTTGGCATAGAGGCGAATCTCGTAAACTATCTCACCAGGCCGCTGGGACAGTCCACGGCAATGGCTGCCAAGAACGTAAATACCTGGTTCGGGATTGCGACTTTACTGCCATTAGTAGGAGCCTTTGTGGCAGATTCCTATATTGGTCGATCTCGGACAACTGTCATCCTTTCTCTTCTCTACATCCTGGTTTGTGATCTCCTTTCATTTTATTAG 324 0.4969 MDAVDHRGLPAKRSTSGGWRSTYFIIGTEVAKRSAYFGIEANLVNYLTRPLGQSTAMAAKNVNTWFGIATLLPLVGAFVADSYIGRSRTTVILSLLYILVCDLLSFY* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1822 107 Gene3D MFS general substrate transporter like domains 1 107 IPR036259 -
Vvi18g1822 107 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 17 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1822 Vvi-Chr18 25007145 25015336 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1822 2 94 Organic Solute Cotransporters AT1G22550 65.591 6.76e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1822 K14638 - vvi:104882761 172.555