Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1819 ATGAGAAAATATCCTTCCGGGTGTGTTTTGTGGCTGGAACTCCCAGAGGCCCCCGATCTCCGCTGCTGGAAGACACAGTCGATGGCTCCATCGATTACAAGGGCCGTCCAGCCAAGAGACCCACTTCCGGCGGTTGGAGATCCGCATATTTCATCATGGTCCAATCTTATAAACTTCTTCACGGACCGACTGGGACAGTCCAATCCCACTGCTGGCGAGAGTGTGAATATATGGACAGGGACGGGGAGTTTGATGCCATTAGTAGGAGCATTTGTTGCAGATTCTTATCTTGGTCGTTATGCCACCATCATTAATGCTTCTCTTCTCTACATCCTGGGATTAGTGTTGTTAACATTATCTGCTGTGTTTCCTGCTCTCAGCCCTTCTAACTGCCCAAAACGCAACAAAACCATATCGTGTTCTCCTCAGCTCCAAATAATCTTTTTTTTTCTCGTTATATTTAGTGGCAGTTGGGCTAGGTGGGCACAAGTCTTGCATCCAGGCTTTTGGAGCAGACCAATTTGA 525 0.4762 MRKYPSGCVLWLELPEAPDLRCWKTQSMAPSITRAVQPRDPLPAVGDPHISSWSNLINFFTDRLGQSNPTAGESVNIWTGTGSLMPLVGAFVADSYLGRYATIINASLLYILGLVLLTLSAVFPALSPSNCPKRNKTISCSPQLQIIFFFLVIFSGSWARWAQVLHPGFWSRPI* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1819 174 Gene3D MFS general substrate transporter like domains 50 156 IPR036259 -
Vvi18g1819 174 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 54 153 - -
Vvi18g1819 174 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 89 113 IPR018456 GO:0006857|GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1819 Vvi-Chr18 24962005 24963721 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1819 54 154 Organic Solute Cotransporters AT1G22540 54.455 2.64e-24 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1819 K14638 - vvi:100249337 141.354