Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1818 ATGGCTACAGAAGATTTAGCTGGAGGAACCTTGCAACACCTTTCTGCATTGTTTCTGAACAAGGCATTGCTTGCACAAGATGGTTCGAAAGGAAATGGAAGGCAGTGTACTATTGATGATGTTGAAGAAGCAAAGGCAGTTTTAAGGTTGTTTCCCATAGGGGCTACTTGTTTGGCCTATGCTATTGTGTATGCTCAGTCATCTACTTTCTTTACAAAGCAAGGATTCACCATGGACAGGTCAATTGGATCAGGGTTTGACATACCAGCTGCTTCACTTCAAGCCTTTATTGGCCTCTCCATTGTCCTCACCATTCCCATCTATGACCGCATCTTTGTTCCCATTGCAAGAACCTTAACTAGGAAGCCATCTGGCATAACAATGCTCCAGAGGATCGGAACAGGCATGTTTCTGTCTGCTATTTCCATGGTAATTGCAGCAAGAACATGGCTTGGTTGA 459 0.4401 MATEDLAGGTLQHLSALFLNKALLAQDGSKGNGRQCTIDDVEEAKAVLRLFPIGATCLAYAIVYAQSSTFFTKQGFTMDRSIGSGFDIPAASLQAFIGLSIVLTIPIYDRIFVPIARTLTRKPSGITMLQRIGTGMFLSAISMVIAARTWLG* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1818 152 Pfam POT family 33 147 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vvi18g1818 152 Gene3D MFS general substrate transporter like domains 6 149 IPR036259 -
Vvi18g1818 152 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 18 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1818 Vvi-Chr18 24961108 24961708 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1818 19 147 Organic Solute Cotransporters AT1G22540 65.116 3.93e-52 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1818 K14638 - vvi:100249337 253.062