Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1816 ATGGCTGGAACTCCCGGAGGCCCCCGATCTCCGCTGCTGGAAGACACCGTCGATGGCTCCATCGATCACAAGGGCCGTCCAGCCAAGAGACCCACCTCCGGCGGTTGGAGATCCGCATATTTCATCATGGGTGCTGAAGTTGCGGGGAGGTTTGCATACTTTGGCATACAGTCCAATCTTATAAACTTCCTCACGGACCGACTGGGGCAGTCCGTACCCTCTGCTGCCGAGAGTGTGAATACATGGACAGGGACGGGGAGTTTAATGCCATTAGTAGGGGCATTTGTTGCAGATTCTTATATTGGTCGTTATGCCACCATCATTATTGCTTCTCTTCTCTACATCCTGGACATCATGCCACCAAGAAGAGCAGCTTTTTCACAAAATAGTCAAGCTAATGATGATGTACCTCCAGTTGAGGGTTTGCCTCCCGTGAGTGTAGAAGGGATCTATAGGTATCTTGGGACACTAGTTGGTTTAGTTGAACACCAAGCTCGAGCTGTTGGGACTAATGTTCAGGGACAGTCTTCATTTTCTAGGGGTAGCTCTTTTGATGACTTCAAGAAATTGGGTCCTCCTTACTTTTCTGGTGTTACAGATCCCACAGAGGCAGAGGCTTGGATCCTTAAGATGGAGAAATTCTTTGGTGTCATAGATTGCTCTGAGGAGCAAAAAGCCTCTTATGCAGCTTTTATGTTAGATAAAGAGGCAGATCATTGGTGGCGTATGACTAGGAGACTTTTGGAGGATCAGGGACCCATAACATGGAAACAATTTAGGGAGGCTTTCTACAAGAAGTATTTCCCTGACAGTGTTAAGCGGCAGAAGGTGGGAGAGTTTATTCGTTTGGAACAGGGGATATGA 864 0.4769 MAGTPGGPRSPLLEDTVDGSIDHKGRPAKRPTSGGWRSAYFIMGAEVAGRFAYFGIQSNLINFLTDRLGQSVPSAAESVNTWTGTGSLMPLVGAFVADSYIGRYATIIIASLLYILDIMPPRRAAFSQNSQANDDVPPVEGLPPVSVEGIYRYLGTLVGLVEHQARAVGTNVQGQSSFSRGSSFDDFKKLGPPYFSGVTDPTEAEAWILKMEKFFGVIDCSEEQKASYAAFMLDKEADHWWRMTRRLLEDQGPITWKQFREAFYKKYFPDSVKRQKVGEFIRLEQGI* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1816 287 Gene3D MFS general substrate transporter like domains 11 129 IPR036259 -
Vvi18g1816 287 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 34 114 - -
Vvi18g1816 287 MobiDBLite consensus disorder prediction 1 33 - -
Vvi18g1816 287 FunFam OSJNBb0008G24.13-like protein 10 129 - -
Vvi18g1816 287 Pfam Retrotransposon gag protein 228 286 IPR005162 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1816 Vvi-Chr18 24949976 24953370 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1816 10 111 Organic Solute Cotransporters AT1G22550 58.824 6.03e-37 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1816 K14638 - vri:117930618 318.931