Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1815 ATGCGTTGGTATCAAATACAGGGATTAGGGTTGTTAACTCTATCTGCTGTGCTTCCTGTTCCCAGCCATTCCGACTGCCAAAAAAGCAACAAAACCATTCCGTGTTCTCCTCCTCAGCTCCAAATGATATTCTTCTTTTTCTCGTTATATTTAGTGGCAGTTGGGCTAGGTGGGCACAAACCTTGCATCCAGGCTTTTGGAGCTGACCAATTTGATGGACGAAATCCAGTGGAGTGTATAGCCAAAAGCTCATTCTTCAACTGGTGGATTTTTGGTGTATTTTCTGTTACCATAGTAACTCAGTCAGTCTTGAGCTACATTCAAGACAACTTGAATTGGGGTCTTGGATTTGGAATCCCATGCATTGGCATGATACTGGGGCTGCTCCTTTTCTTGCTTGGGACTAGGACTTATCGGTATAGTGTCAAAGGCCATGAGAGAGGCCCATTTATGAGAATCGGTCAGGTGTTTATTGCAGCAGCTAAGAACTGGCTAGCAACACCTTCATCAATAGCTACAGAAGATTTAGCCGGAGGAACCTTGCAACAACAAGATTCTCAACACTTCAAGTTTCTGAACAAGGCATTGCTTGCACAAGATGATTCGAAAGGAAATGGAAGACAGTGTACTATTGATGATTTTGAAGAAGCAAAGGCAGTTTTAAGGTTGTTTCCCATAGGGGCTACTTGTTTGGCCTATGCTATTGTGTATGCTATTGTGTATGCTCAGTCATCTACTTTCTTTACAAAGCAAGGATTCACCATGGACAGATCAATTGGATCAGGGTTTGACATACCAGCTGCTTCACTTCAAGCCTTTATTGGCCTCTCCATTGTCCTCATCATTCCCATATATGACCGCATCTTTGTTCCCATTGCAAGAACCTTAACTAGGAAGCCATCTGGCATAACAATGCTCCAGAGGATCGGAACAGGCATGTTTCTGTCTGGTATTTCCATGGTAATTGCAGCACTAGTTGAGATGAAACGGCTCAAAACTGCGCAAGAACATAGCTTGGTTGATGTGCCAAATGCAACTCTTCCAATGAAAGTATGGTGGTTGCTTCCCCAATACATCTTGTTTGGAATTACTGATGTGTTCACCGTGGTCGGTCTTCAAGAGTTTTTCTATGATCAAGTCCCAACTGAATTAAGGAGTGTCGGTCTCGCCCTCTGCCACTGTATCTTTGGAGTAGGGAGCTTCTTGAGCAGCTTTCTTATCTCTGGAATTGAGAAAGCAACTGGTGGAGATGGTCAACATAGCTGGTTCAACAACAATGTTAATCGGGCACATCTCGATTACTATTATTGGGTTCTTGCAGGGCTGAGTGCGGTAGGATTGAGTTTATACTTGTATTTTGCAAGATCTTACATATACAATAGGGGACGTGCATTATGA 1398 0.4313 MRWYQIQGLGLLTLSAVLPVPSHSDCQKSNKTIPCSPPQLQMIFFFFSLYLVAVGLGGHKPCIQAFGADQFDGRNPVECIAKSSFFNWWIFGVFSVTIVTQSVLSYIQDNLNWGLGFGIPCIGMILGLLLFLLGTRTYRYSVKGHERGPFMRIGQVFIAAAKNWLATPSSIATEDLAGGTLQQQDSQHFKFLNKALLAQDDSKGNGRQCTIDDFEEAKAVLRLFPIGATCLAYAIVYAIVYAQSSTFFTKQGFTMDRSIGSGFDIPAASLQAFIGLSIVLIIPIYDRIFVPIARTLTRKPSGITMLQRIGTGMFLSGISMVIAALVEMKRLKTAQEHSLVDVPNATLPMKVWWLLPQYILFGITDVFTVVGLQEFFYDQVPTELRSVGLALCHCIFGVGSFLSSFLISGIEKATGGDGQHSWFNNNVNRAHLDYYYWVLAGLSAVGLSLYLYFARSYIYNRGRAL* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1815 465 Pfam POT family 9 422 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vvi18g1815 465 FunFam POT family protein 3 463 - -
Vvi18g1815 465 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 6 459 - -
Vvi18g1815 465 SUPERFAMILY MFS general substrate transporter 42 455 IPR036259 -
Vvi18g1815 465 Gene3D MFS general substrate transporter like domains 3 464 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1815 Vvi-Chr18 24941768 24943332 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1815 6 461 Organic Solute Cotransporters AT1G22540 62.281 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1815 K14638 - vvi:100249337 897.501