Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1808 ATGGCTCACACGCAAGCTATCAGATGGACCAAGGTCCAAGACGTGGAAGAGAAGCACATCCAGGAGTTGGGAGAATACGCCGTGGAGGAGCAGAACAAGAAGGAAAACTGGAACCTGGAATTCGAGAAAGTGTCTATGGGGTGGTTTCAGCACCTGGCAGGAAACATTTACAAACTCCATATCAAAGCCGATCTCGCCGGCACGTCCGGCGACTACGAGGCAATTGTGTGGAAGAAGCATAATCAGTGCAATGAGCTGATGTCCTTTCAGGAGCTTTAA 279 0.4982 MAHTQAIRWTKVQDVEEKHIQELGEYAVEEQNKKENWNLEFEKVSMGWFQHLAGNIYKLHIKADLAGTSGDYEAIVWKKHNQCNELMSFQEL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1808 92 SUPERFAMILY Cystatin/monellin 9 90 IPR046350 -
Vvi18g1808 92 PANTHER PHLOEM FILAMENT PROTEIN 7 91 IPR027214 GO:0004869
Vvi18g1808 92 Gene3D - 6 92 - -
Vvi18g1808 92 Pfam Aspartic acid proteinase inhibitor 12 91 IPR000010 GO:0004869
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1808 Vvi-Chr18 24839279 24839557 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1808 - - vvi:100260470 70.0922