Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1807 ATGGAGCCGACACCCAGACACTCATGCCTGAAGCTTCAAATTCCTAACCAATCGGAACCCATCTTCATCAAGGCCACCTGGTTTCCTTCCCATTTCCACCTCTCTATCACCGACAGCCTCCACACCTGGCTCTGTAACGCATCGGAAGACGAGGTCCGAGAGCGAGCCGCCCAGTGGGATCAACCTGTTTCTGATTACATCGCCTTGGCTGAGCGGTTCCTAGGGTTTCAGCAGCCCGGTTCGGTTTACGGGTTCTCCGACGCGGGTGACGGCCATAGAAGATTGCCATGGACATTTGAGAAGGAAGGGACTAAGCTAGAATGGCGGTGGAAATGTGGACCCTTCATTGGAGCTACTCTAGCTACCCTGCAGCCACGTGTTTCATGCAGAATGCTTGGAGCAGTTGACTCCAAATCAAGCCTCCACCCTTGCATGAACTATGCATGGCCACCTTTGACCACGTGTCACCTCCTTTTATTCCTCTCATTTCACCATCCTTAG 501 0.5289 MEPTPRHSCLKLQIPNQSEPIFIKATWFPSHFHLSITDSLHTWLCNASEDEVRERAAQWDQPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLPWTFEKEGTKLEWRWKCGPFIGATLATLQPRVSCRMLGAVDSKSSLHPCMNYAWPPLTTCHLLLFLSFHHP* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1807 166 PANTHER DNA REPAIR PROTEIN XRCC4 5 114 IPR010585 GO:0003677|GO:0005634|GO:0006302|GO:0006310
Vvi18g1807 166 Gene3D - 10 111 IPR038051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1807 Vvi-Chr18 24825869 24826369 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1807 K10886 - vri:117908272 254.988