Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1799 ATGGCTACCGGAGTAGAGTGGAAGGAATCGGAGAAGGTGGCCGGAATCGCCCTGGAGTTTCCGGCCAATGACAATGCAACGTCGTCTCCTTCTTCGCCTCACAAGCTTCCTCGGCGACTTCGCCGGCGTCTCCTCGAGTCGAAGAGCCCTTCTACGGTGGAAGATATCGAAGCTAAGCTCAAAGAGGCCGATCTCCGCCGCCAGCAATTCTATGAAGGTTTATCAAACAAGGCGCGACCCAAAATGAGAAGTCACTCATGGTCCCCTTTGCAAGAGGCAGACCTTGGTCAGAGGCTTGAAGCAAAACTTAAGGCTGCTGAGCAAAAAAGGTTGAGCATTCTAGCTAATGCTCAAATGCGGTTGGCAAAGTTGGATGAGTTGCGACAAGCAGCTAAAACTGGACTAGAAATGCGTTTTGTGAAGGAACGTGATGAGCTTGGTATGAAGGTTGAATCAAGAGTACAGCAAGCGGAGACAAACAGGATGCTTCTCCTCAAAGCTTATAGGCAACGTAGGGCTGCAAAGGAAGAGCGCGCTGCTCAGTCATTGATGAGGAGGATGATTCAGGACAGCAAGTATAAGGAGTGTGTGCGTGCTGCAATTCACCAAAAACGTGCTGCTGCTGAGAGGAAAAGGTTGGGATTGTTGGAAGCAGAGAAGACAAGGGCACATGCAAGGGTATTGCAAGTGCGGAAGGTAGTCAAGTTTGTTTATAGTCAGCGTGAAATTGAAAGAAGAAGAATGAAGGATCAACTAGAAGATCGGCTCCAAAGGGCTAAAAGACAAAGAGAAGAACACTTGAGGCAGAAAGGGAGTTTGCATAGTTCTGTTTGTGCCAATTCAAAAGTGATAAATGAGCAAGGGGAGCTCCTTGCAAGAAAGTTAGCAAGGTGCTGGAGACGATTTGTGAGATTGAGGAGAACAACTTTTTCATTGACAAAATCTTACAATGACTTAGAAATCTCTCTAGAGTCTGTTAGGTCGATGCCATTTGAGAAGCTTGCCCTCCAGATGGAGTCAGCCAACACTATCCAAACTGTGAAAGCTTTACTTGACCGTTTTGAGAGTCGCCTCATGATCTCACATGCAGCTACCCCTACCAGGAGTCTATCTAATTTAGAAAACATTGATAACCTTCTTATGCGTGTCACTTCTCCAAAGCGAAGGGGCAATACCAATAACAGAGGGGTAAACAGAGTGGGTTCCATCAGAGAAGGAGCTCAAAGACAAGTTAAATTATCAAGGTACCTAGTGAGGGTTGTGCTCTGTGCTTACATGATATTGGGACACCCAGATGCAGTTTTCAGTGAAAAGGGAGAGCATGAAATTGCTCTGGCCGAGTCAGCAGCAACATTTGTCCAAGAGTTTGAGTTGCTGATCAAGATTATATCAGATGGCCCTACTCACACTACTCAAGGGGGAACAAACTCCTCAGCTCCTAATCAACTGACCTTCAGATCCCAGCTGGAAGCTTTTGATAGATCATGGTGCTCTTACCTGTATTCCTTTGTGGCATGGAAGGTTAAGGATGCAAAGCTGTTAGAGGAGGATTTGGTGAAAGCTGCTAGCCAACTGGAGGTTTCCATGATGCAAAATTGCAAGCTGACTCCAGAAGGGGATAATGGCAGTCTTTCTCATGATATGAAGGCCATACAAAAGCAGGTGACAGAGGATCACAAACTTTTAAGGACTAAAGTCCAGAATCTGAGTGGTAATGCTGGGCTTGAACAGATGGAATTTGCTCTCTCTGATGCATGGTCTAGATTCTTTGAAGCCAAGGAGACTGGAAGTTCATTAGTATCATCAGTTGCTCATATTTCTTCTCCAATTCTGCCTGGTTCATCAAATAACTCTTCAATTTTGGGTGAAATGGGGAGTATTTCTGAAAGCATGGAGAGGTCAGACCATATTGTGTATCCCTTGTTTAAGAAAGATGATTCTTCCCCAGGAAATGAAGTGGTTTCATCCACTCCTTTGAGAAGTGACGTGGACGGCTATGGTGCAATGTCAGTCACTGAGAATGAACTACTTGTAAATGAGATTGTTCATGAGCATGGCCATGGTTTTGCAGATAGCTTTGATGTTAGTGACAATGATCAGAGTAGTATAAAGGAAAAAGTTAGGGAAACAATGGAAAAGGCATTCTGGGATGGGATCATGGACTCCTTGAAACAGGATGAGCCTGACTACAGTTGGGTTCTTAAACTCATGAAGGAAGTCAAGGATGAACTATGCGAGATGTCTCCTCAAAGTTGGAGACAGGAGATTGTGGAGACCATTGATATTGATATTCTCCCACAGGTGCTGAGAGCAGAAATATTAGACATTGATTTCCTTGGAAAGATCCTAGAGTTTGCCTTGGTCACTTTGCAGAAACTTTCTGCTCCTGCTAATGATGACAAGATGAAGGCTGCTCACTACAAGTTATTAAAAAGACTCAGAGATGCTTCACAGGCTGGAGATAAATCAAATGCTTCATTTGCCCTCTTGATGGTTGAGGGTTTGCGGTTTGTTCTAGAGCAGATTCAGACTCTTAGGCAAGAAATTAGCAGAGCACGCATAAGAATGATGGAACCACTCATAAAGGGGCCTGCTGGTTTGGAATACCTGAAGAAAGCTTTTGCCAACCGGTATGGACCACCCACTGATGCCCATACTTCTCTACCATTGACCATGCAATGGCTTTCATCAGTGCATTCAAGTGCAGAGCAGGAGTGGGATGAATACAAGGATTCTGTATCATCTTTGACAGTGAACAATGAAAGATTATATCAGGGCCTTCCACCCACCACTCTCCGAACTGGTGGCAGTATTCCAATGGCATCCAGATTAGGCTCTCCAAGTTCTAAAGGTGATGAACAACCGGAATGCAAGGGAGAAAGGGTTGATTTGTTAGTGCGGGTGGGTCTGTTAAAGCTGGTGAATGAGATTGGGGGCCTGATGCTGGAAACTCTGCCTGAAACTCTTAAGCTTAACCTCTCCAGGCTAAGGGGTGTCCAGTCTCAATTTCAGAAGATCATTGTGATTGCTACCAGCGTGTTGGTTCTCCGGCAAACTCTTCTGAGCGAGAACATGGTGACTACTGCGGCAGACATGGAGAACATAGTATCCAGCTGCATTAAGCAGCTCTCCAAGCTATTGGACACTGTTGAAGATGTGGGCATATCCGAAATTGTTGGAACGATCAGTAGCTTCCCAGAAGGTAACAACCATACCCTGAACCCTGAGAAGCTCCAAGCCAGAAAGGAGGTGATGGCAAACATGCTGGGAAAGAGCTTACAAGCTGGAGACGCCATATTCACCCGGGTATCCCACACTGTCTACTTGGCCGCAAGAGGGATTGTGCTGGGTGGGAACGGACTTAAGGGTAGGCAATTGGCAGAAGCAGCACTCCGACGCATAGGAGCTTCTCTTCTCACAGAAAATGTGGTGGAGGCTGCAGAAGTGTTGATCGTGGTGACCACCGTTTCAAGCAGTGTTCATGGAGCATGGTATGAAGAATTGGTTAAGAACCTGTGA 3519 0.4572 MATGVEWKESEKVAGIALEFPANDNATSSPSSPHKLPRRLRRRLLESKSPSTVEDIEAKLKEADLRRQQFYEGLSNKARPKMRSHSWSPLQEADLGQRLEAKLKAAEQKRLSILANAQMRLAKLDELRQAAKTGLEMRFVKERDELGMKVESRVQQAETNRMLLLKAYRQRRAAKEERAAQSLMRRMIQDSKYKECVRAAIHQKRAAAERKRLGLLEAEKTRAHARVLQVRKVVKFVYSQREIERRRMKDQLEDRLQRAKRQREEHLRQKGSLHSSVCANSKVINEQGELLARKLARCWRRFVRLRRTTFSLTKSYNDLEISLESVRSMPFEKLALQMESANTIQTVKALLDRFESRLMISHAATPTRSLSNLENIDNLLMRVTSPKRRGNTNNRGVNRVGSIREGAQRQVKLSRYLVRVVLCAYMILGHPDAVFSEKGEHEIALAESAATFVQEFELLIKIISDGPTHTTQGGTNSSAPNQLTFRSQLEAFDRSWCSYLYSFVAWKVKDAKLLEEDLVKAASQLEVSMMQNCKLTPEGDNGSLSHDMKAIQKQVTEDHKLLRTKVQNLSGNAGLEQMEFALSDAWSRFFEAKETGSSLVSSVAHISSPILPGSSNNSSILGEMGSISESMERSDHIVYPLFKKDDSSPGNEVVSSTPLRSDVDGYGAMSVTENELLVNEIVHEHGHGFADSFDVSDNDQSSIKEKVRETMEKAFWDGIMDSLKQDEPDYSWVLKLMKEVKDELCEMSPQSWRQEIVETIDIDILPQVLRAEILDIDFLGKILEFALVTLQKLSAPANDDKMKAAHYKLLKRLRDASQAGDKSNASFALLMVEGLRFVLEQIQTLRQEISRARIRMMEPLIKGPAGLEYLKKAFANRYGPPTDAHTSLPLTMQWLSSVHSSAEQEWDEYKDSVSSLTVNNERLYQGLPPTTLRTGGSIPMASRLGSPSSKGDEQPECKGERVDLLVRVGLLKLVNEIGGLMLETLPETLKLNLSRLRGVQSQFQKIIVIATSVLVLRQTLLSENMVTTAADMENIVSSCIKQLSKLLDTVEDVGISEIVGTISSFPEGNNHTLNPEKLQARKEVMANMLGKSLQAGDAIFTRVSHTVYLAARGIVLGGNGLKGRQLAEAALRRIGASLLTENVVEAAEVLIVVTTVSSSVHGAWYEELVKNL* 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1799 1172 MobiDBLite consensus disorder prediction 19 39 - -
Vvi18g1799 1172 Coils Coil 835 855 - -
Vvi18g1799 1172 MobiDBLite consensus disorder prediction 927 949 - -
Vvi18g1799 1172 Pfam T-complex protein 11 677 1169 IPR008862 -
Vvi18g1799 1172 PANTHER TESTIS-SPECIFIC PROTEIN PBS13 T-COMPLEX 11 63 1170 IPR008862 -
Vvi18g1799 1172 Coils Coil 242 269 - -
Vvi18g1799 1172 MobiDBLite consensus disorder prediction 927 957 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1799 Vvi-Chr18 24686493 24706658 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1799 - - vvi:100252816 2207.95