Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1797 ATGGAGGTTGTTGGAGAGGCTTTTCTTTCAGCTGCCATCGGCCTGCTGTTTGAGAAGTTGGCCTCGTCAGATTTGTGGAGGTTTGCCAAAAAAATGTGGGTTCATACTGACCTCAAGACATGGGAGAAAGAATTGTCGAATATTCGGAGAGAGCTCAATGACGTCGAGGAGAAGCAGATCGCAGACAAGTCCGTGAAAGAATGGCTGAGCGATCTGAGGGATTTGGCTTATGATATGGAGGACGTCCTGGGCGAGTTCGCCTACGATGCTTTGGGACAACAGCTGAAGGCGGCGGAGTCTGATCAAGCCAGCACAAGCCAGGTACGCAAGCTCATCTCTATTTGTAGTCTAACCGAAATCAGGCGGCGTGCGAACGTGAGGTCCAAGGCCAAGGAAATCACTTGCCGGTTAGAAGAGATCTCAGCTCGAAAATCTGAGCTTGGTTTGGAAAAAATGGCAGCTGCAGCAACCACTTCTGCTTGGCAAAGCTCTACCACAACATCAATGGCGTAG 513 0.501 MEVVGEAFLSAAIGLLFEKLASSDLWRFAKKMWVHTDLKTWEKELSNIRRELNDVEEKQIADKSVKEWLSDLRDLAYDMEDVLGEFAYDALGQQLKAAESDQASTSQVRKLISICSLTEIRRRANVRSKAKEITCRLEEISARKSELGLEKMAAAATTSAWQSSTTTSMA* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1797 170 Gene3D - 11 126 - -
Vvi18g1797 170 Pfam Rx N-terminal domain 8 100 IPR041118 -
Vvi18g1797 170 PANTHER TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 13 HOMOLOG 37 147 - -
Vvi18g1797 170 Coils Coil 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1797 Vvi-Chr18 24652979 24653491 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1797 - - vvi:100260928 183.726