Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1785 ATGGTGGTTGCTCATGGTGGCCGATGTGCTGAACGTGTTGTGTTTGGCGATGAGATAACTGATGGAGGAAGAGATGACCTAGAAAAGATTACGAAAATTGCTAGAGAGATGGTAATCAGCCCAGCAAATTCAAGGTTGGGGCTTACTGCTTTGACAAAACGAGTGGGGTTAATGGATAGACCTGATAGTCCAGATGGCGAGTTGATAAAGTACATGTACATTGAAGAGACAGAAGAAATTGCAATGAGTGGTTTGAAGGTGAACAGGCACATACTGGATATGATTACAAACGAACTGTTGGAAAATTCAAGGATAACTAGATTGGAGGGACCCTTGCCTCACAACGATCGGGTGAGATATCAGCCACTGGACCTATATCCTGCTCCACTCCACATATGTTAA 402 0.4378 MVVAHGGRCAERVVFGDEITDGGRDDLEKITKIAREMVISPANSRLGLTALTKRVGLMDRPDSPDGELIKYMYIEETEEIAMSGLKVNRHILDMITNELLENSRITRLEGPLPHNDRVRYQPLDLYPAPLHIC* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1785 133 Gene3D Peptidase M41 1 110 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Vvi18g1785 133 PANTHER ATP-DEPENDENT PROTEASE 1 80 - -
Vvi18g1785 133 SUPERFAMILY FtsH protease domain-like 1 107 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Vvi18g1785 133 Pfam Peptidase family M41 1 102 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1785 Vvi-Chr18 24490101 24492696 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1785 K03798 - vvi:100244978 233.032