Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1781 ATGTCAATGAGCGAAGATGAGGAGGCGGAAAGACGTCGCTTAAGGCGCCAGAGGGAGATTGAAGAAGCCCTCGAAGTCAAGTCTCTCAGACGCATCATCAGCGCATATCTCAACTATCCAGATGCTGCAGAAGATGATGTCAGAAGATATGAAAGATCTTTTAGAAGGCTTCCACCTGCCCACAAGGCTTTATTGTCTCACTACCCTTCAAAATTTCAAAGGCTGAGACGGTGTATTTCAGTGAATTCTTTTTTCATATTTAACATGCTTCAGGCATTTGAGCCCCCTCTTGATATGAGCCAGGACACAGATATGTGTGAAAACCCACATCTGGAAAATGCTCTGGATGATCATCTTGACTCTGGAGAGAGAAATATTTGCCCTTGCGAGGCTGCCTCAACGAGTGGGAGAATATCTTTTCCCCAATCTGATCAAGCCAGTTATGGGAAGAGCGATATAACATGCAAGTCACCAGAAGGGGTTAATAATAAGGAGTTGGGAACTGAAAGTTGCTGTGAGTCTGGTCCTGGGATCTGTAATGCGTACCCAGGAAATAACAGAGAGACGGATCAAGCTGGTAGTAGTGATGTTAAGATTAATAATGATGAGGCGACACCATATTCCTTTGCTGATTCCAATGGAAATGTATCTTCATCAACTCATGAGTGGTTGGATCCGTCATTTCAGTTGAATGTTCCTCTAGTTGATGTTGATAAGGTTCGTTGTATTATAAGAAACATAGTAAGAGATTGGGCTGCAGAGGGACAAAAGGAGCGTGACCAGTGCTACAAGCCTATTCTTGAAGAGCTTGATGGTCTATTCCCAAATCGCTCTAAGGATAGGCCTCCTTCCTGTTTAGTTCCTGGTGCTGGACTTGGGCGGCTGGCATTGGAGATTTCCTGTCTTGGTTTCATAAGCCAAGGAAACGAATTTTCATATTACATGATGATATGCTCAAGTTTTATTCTCAATAATGCTCAAACTGCTGAGGAGTGGACAATTTATCCTTGGATCCACAGCAATTGCAATTCACTATCAGAAAACGACCAACTTCGTCCTGTTTCGATTCCTGATATGCATCCAGCCAGTGCAGGGATCACTGAAGGCTTTTCAATGTGTGGTGGTGACTTTGTTGAAGTCTATAGCGATCCAAGCCAAATAGGAGTTTGGGATGCAGTTGTGACCTGCTTCTTCATTGATACAGCACACAACATCGTGGAATACATTGAAATCATATCAAGAATCCTCAAAGATGGTGGTGTCTGGATCAATTTTGGACCCCTGCTGTATCACTTTGCGGATATGTATGGACAAGAAGATGAGATGTCCATTGAACTAAGTTTGGAAGATGTGAAGAAGGTTGCTTTACACTATGGATTTCAAATGGAGAAAGAAAGGACCATTGAGACGACCTACACAACGAATCCTCGATCCATGATGCAAAACCGATACTTTGCTGCATTTTGGACAATGAGAAAGAAACCAGTGGCAACCTGA 1497 0.4309 MSMSEDEEAERRRLRRQREIEEALEVKSLRRIISAYLNYPDAAEDDVRRYERSFRRLPPAHKALLSHYPSKFQRLRRCISVNSFFIFNMLQAFEPPLDMSQDTDMCENPHLENALDDHLDSGERNICPCEAASTSGRISFPQSDQASYGKSDITCKSPEGVNNKELGTESCCESGPGICNAYPGNNRETDQAGSSDVKINNDEATPYSFADSNGNVSSSTHEWLDPSFQLNVPLVDVDKVRCIIRNIVRDWAAEGQKERDQCYKPILEELDGLFPNRSKDRPPSCLVPGAGLGRLALEISCLGFISQGNEFSYYMMICSSFILNNAQTAEEWTIYPWIHSNCNSLSENDQLRPVSIPDMHPASAGITEGFSMCGGDFVEVYSDPSQIGVWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINFGPLLYHFADMYGQEDEMSIELSLEDVKKVALHYGFQMEKERTIETTYTTNPRSMMQNRYFAAFWTMRKKPVAT* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1781 498 SMART N2227_2 226 495 IPR012901 GO:0008757
Vvi18g1781 498 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 244 486 IPR029063 -
Vvi18g1781 498 Coils Coil 4 24 - -
Vvi18g1781 498 Gene3D Vaccinia Virus protein VP39 248 491 IPR029063 -
Vvi18g1781 498 Pfam Carnosine N-methyltransferase 229 494 IPR012901 GO:0008757
Vvi18g1781 498 PANTHER UNCHARACTERIZED 18 493 IPR012901 GO:0008757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1781 K19787 - vvi:100852521 1009.21