Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1772 ATGTTGATCACACATGAGGGGAGTCCCTTAAGTGAAACTTCCCTCACCCACAGCCAACATGTGGGCTTCTGTAGCCACACACATCAGCTAGATGTGGCCATTTCGTGTTCAGGAGTGCGGTTCATGCACTGCCATGTAGAACAACATCTGACTTGGGGCATGGAAACTGCATTCATAGTGAACAATGGTAAACGCCTAGAAGCTCAAATGTTGTCTCCTCCATCCGACATGCCGCCATGTTGA 243 0.4897 MLITHEGSPLSETSLTHSQHVGFCSHTHQLDVAISCSGVRFMHCHVEQHLTWGMETAFIVNNGKRLEAQMLSPPSDMPPC* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1772 80 Gene3D - 29 80 IPR008972 -
Vvi18g1772 80 Pfam Multicopper oxidase 37 63 IPR011706 GO:0005507|GO:0016491
Vvi18g1772 80 ProSitePatterns Multicopper oxidases signature 2. 43 54 IPR002355 GO:0005507
Vvi18g1772 80 SUPERFAMILY Cupredoxins 37 80 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1772 Vvi-Chr18 24193562 24194821 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1772 K05909 - vvi:100243122 98.5969