Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1770 ATGGCCACCCTCCGAAGCTTAGCAGATGCGGAACATCCTTGCAATGTCCCATTGAGCACGAGCACTAAACTGATTTACACTGTTTCTGTAAACTCGTACCCATGCGTCAATGATTCATGTTCAAGTTCCAATGGGTTGAGATCCGCCGCAAGTACAAACAACATAAGCTTTCATACCCCTACAATTGACATACTAGAAGCTTACTATTATAACATCAGTGGTGTATATGGAGATAAATTTCCTAGCGTTCCACCAGTGGTGTTTGATTTTACAGCATATTATCTTCCATTACTCTATCAGTTGCCGAGCGCCGGAACAGAAGTAAGGGTGCTCGAGTATAACTCCACAGTGGAGATTGTTTTGCAAGGGACAAACTTGGTTGCAGGGGTAACCCACCCCATGCATCTCCATGGACACAGTTTCTATGTTGTTGGATGGGGATTTGGGAATTTCGATGAAAATAGGGATCCTTTGCACTACAATCTGGTGGATCCTCCCCATCAGAATACCATCGATCTCTGTTCCTAA 528 0.4413 MATLRSLADAEHPCNVPLSTSTKLIYTVSVNSYPCVNDSCSSSNGLRSAASTNNISFHTPTIDILEAYYYNISGVYGDKFPSVPPVVFDFTAYYLPLLYQLPSAGTEVRVLEYNSTVEIVLQGTNLVAGVTHPMHLHGHSFYVVGWGFGNFDENRDPLHYNLVDPPHQNTIDLCS* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1770 175 Gene3D - 35 174 IPR008972 -
Vvi18g1770 175 SUPERFAMILY Cupredoxins 47 173 IPR008972 -
Vvi18g1770 175 Pfam Multicopper oxidase 103 173 IPR011706 GO:0005507|GO:0016491
Vvi18g1770 175 PANTHER MULTI-COPPER OXIDASE 3 171 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1770 Vvi-Chr18 24164574 24165101 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1770 K05909 - vvi:100855341 347.436