Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1765 ATGTGGCTGATCATGAAGGTTTTCCTCTTGCAAATTTTAGTGTTTCAACTTTTTGGTGGTGACATCCATTGCCAAGCTTCAATCCGTCGGCACACTTTTGTGGTGAGGGAAGCTTCATATACAAGGCTTTGTAGCACCAAGGACATCTTAACAGTAAATGGACAATTTCCGGGACCAACTATACATGCTATGAAAGGAGAGACGATCATTGTTGACGTTTATAATAGGGGAAAAGAAAATGTCACCATTCACTGGCATGGGGTGAACATGCCTAGATATCCATGGACAGATGGTCCTGAGTATATCACACAATGCCCAATTCAGCCAGGGTCAAACTTTAGTCAGAAGATCATCCTTTCCTCTGAGGAAGGTACTTTATGGTGGCATGCTCATAGTGATTGGACCCGAGCCACTGTTCATGGAGCTATAATTATCTATCCTAAGAAGGGAACCAAGTATCCTTTTCACAAACCTAACGCAGAATTTCTTATCATATTAGGACAATGGTGGAAGAGTGATGTGAATGCGGTTCGAGATGAAGTGCTTGCAATTGGAGCTGATGTCAATGCCTCTAATTCTTTATTGATAAATGGACAACCCGGTGATCTACTTCCATGCTCAAAATCAGGCACATTCAAGCTAACAGTGGATCATGGAAAGACATATCTTCTTCGCATAATCAATGCTGCGTTGCACGAGCCTCTTTTCTTCTCCGTTACCAAGCATAAAATGACAGTGGTTGGAACAGATGGTAGCTACACGAAACCATTGACCCAAAATTACATCACAATATTTCCTGGCCAAACCTTTGATGTCTTACTAGAAGCTAACCAACGCCCGGATCACTATTACATGGCGGCTATAACTTATTCCGAAGCCCCGACAGGTTTTAATATTTATGATAACACAACCACCACAGCTATTGTACAATACAGTGGATACTACACTCCATCTTCACCTCCCTTCTTGCCTCATTTACCTGCATACAATGACACAAATGCATCGCTTCAGGTCATGGCCGGCCTCCGAAGCTTAGCAGATGCGGAACATCCTTGCAATGTCCCATTGAGCACGAGCACTAACCTATTTTATACCGTTTCTTTAAACTCGTACCAATGCATCAATGATTCATGTTCAGGGGTCAATGGGACGCGGTCCGCCTCAAGTATAAACAACATAAGCTTCCATACCCCTACAATTGACATATTGGAAGCTTACTATTATAACATCAGTGGTGTATATGGAGATAAATTTCCTAGTGTTCCACCACTGGTGTTCAATTTTACATATGATTATCTTCCATTACTCTATCAGTTGCCGAGCACTGGAACAGAAGTAAGGGTGCTCGAGTATAACTCCACAGTGGAGATTGTTTTTCAAGGGACAAACTTGGTTGGAGGGACAAACCACCCCATTCATCTCCATGGACACAGTTTCTATGTTGTTGGGTGGGGATCTGGGAATTTTGATGAAAATAAGGATCCTTTGCGCTACAATCTGGTGGATCCTCCCCATCAGAATACCATCTATGTTCCTAGGAATGGTTGGGCTGCAATCAGATTCGAGGCATCCAACCCTGGAGTGTGGTTCATGCACTGCCATATAGAACGCCATCTGAGTTGGGGCATGGAAACTGCGTTCATAGTGAAAAATGGTAAACACCCAGAAGCTCAAATGCTGCCCCCTCCATTTGACATGCCGCCATGTTGA 1710 0.4333 MWLIMKVFLLQILVFQLFGGDIHCQASIRRHTFVVREASYTRLCSTKDILTVNGQFPGPTIHAMKGETIIVDVYNRGKENVTIHWHGVNMPRYPWTDGPEYITQCPIQPGSNFSQKIILSSEEGTLWWHAHSDWTRATVHGAIIIYPKKGTKYPFHKPNAEFLIILGQWWKSDVNAVRDEVLAIGADVNASNSLLINGQPGDLLPCSKSGTFKLTVDHGKTYLLRIINAALHEPLFFSVTKHKMTVVGTDGSYTKPLTQNYITIFPGQTFDVLLEANQRPDHYYMAAITYSEAPTGFNIYDNTTTTAIVQYSGYYTPSSPPFLPHLPAYNDTNASLQVMAGLRSLADAEHPCNVPLSTSTNLFYTVSLNSYQCINDSCSGVNGTRSASSINNISFHTPTIDILEAYYYNISGVYGDKFPSVPPLVFNFTYDYLPLLYQLPSTGTEVRVLEYNSTVEIVFQGTNLVGGTNHPIHLHGHSFYVVGWGSGNFDENKDPLRYNLVDPPHQNTIYVPRNGWAAIRFEASNPGVWFMHCHIERHLSWGMETAFIVKNGKHPEAQMLPPPFDMPPC* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1765 569 SUPERFAMILY Cupredoxins 155 348 IPR008972 -
Vvi18g1765 569 SUPERFAMILY Cupredoxins 380 568 IPR008972 -
Vvi18g1765 569 Pfam Multicopper oxidase 162 313 IPR001117 -
Vvi18g1765 569 Gene3D - 156 347 IPR008972 -
Vvi18g1765 569 CDD CuRO_1_LCC_plant 31 147 IPR034288 GO:0005507
Vvi18g1765 569 NCBIfam laccase 26 569 IPR017761 GO:0046274|GO:0048046|GO:0052716
Vvi18g1765 569 CDD CuRO_3_LCC_plant 413 552 IPR034289 GO:0005507
Vvi18g1765 569 SUPERFAMILY Cupredoxins 25 171 IPR008972 -
Vvi18g1765 569 PANTHER MULTI-COPPER OXIDASE 34 557 IPR045087 -
Vvi18g1765 569 Pfam Multicopper oxidase 35 149 IPR011707 GO:0005507
Vvi18g1765 569 CDD CuRO_2_LCC_plant 164 311 IPR034285 -
Vvi18g1765 569 ProSitePatterns Multicopper oxidases signature 1. 527 547 IPR033138 -
Vvi18g1765 569 ProSitePatterns Multicopper oxidases signature 2. 532 543 IPR002355 GO:0005507
Vvi18g1765 569 Gene3D - 26 152 IPR008972 -
Vvi18g1765 569 Pfam Multicopper oxidase 442 552 IPR011706 GO:0005507|GO:0016491
Vvi18g1765 569 Gene3D - 372 569 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1765 Vvi-Chr18 24019666 24022384 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1765 K05909 - vvi:100248240 1192.95