Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1760 ATGGCGGCTATAACTTATTCCGAAGCCCCAACAGGTCTTAATATTTATGATAACACAACCACCACAGCTATTGTACAATACAAGGGAAACTACACTCCATCTTCACCTCCCTTCTTACCTCATTTACCTGCATACAATGACACAAATGCAACGCTTCAGGTCATGGCCAACCTCCGAAGCTTAGTAGATGCGGAACATCCTTGCAATGTCCCATTGAGCACGAGCACTAACCTGTTTTACACCGTTTCTTTAAACTCGTACCCATGCGTCAATGATTCATGTTTAGGGGCCAATGGGACGCGAACCGTCTCAAGTATAAACAACATAAGCTTTCATACCCCTACAATTGACATACTAGAAGCTTACTATTATAACATCACTGGTGTATATGGAGATAAATTTCCTAGCTTTCCACCACTAGTGTTCAATTTTACATATGATTATCTTCCATTAGTCTATCAATTGCCAAGCACCGGAACAGAAGTAAGGGTGCTCGAGTATAACTCCACAGTGGAGATTGTTTTTCAAGGGACAAACTTGGTTGGAGGGATAACCCACCCCATGCATCTCCATGGACAGAGTTTCTATGTTGTTGGATGGGGATTTGGGAATTTCGATGAAAATAGGGATCCTTTGCGCTACAATCTGGTGGATCCTCCCCATCAGAATACCATCTATGTTCCTAGGAATGGTTGGGCTACAATCAGATTCGAGGCATCCAACCCTGGAGTGTGGTTCATGCACTGCCATATAGAACGCCATCTGAGTTGGGGCATGGAAACAGCGTTCATAGTGAAAAATGGTAAACACCCAGAAGCTCAAATGCTACCTCCTCCATCTGACATGCCGCCATGTTGA 858 0.4382 MAAITYSEAPTGLNIYDNTTTTAIVQYKGNYTPSSPPFLPHLPAYNDTNATLQVMANLRSLVDAEHPCNVPLSTSTNLFYTVSLNSYPCVNDSCLGANGTRTVSSINNISFHTPTIDILEAYYYNITGVYGDKFPSFPPLVFNFTYDYLPLVYQLPSTGTEVRVLEYNSTVEIVFQGTNLVGGITHPMHLHGQSFYVVGWGFGNFDENRDPLRYNLVDPPHQNTIYVPRNGWATIRFEASNPGVWFMHCHIERHLSWGMETAFIVKNGKHPEAQMLPPPSDMPPC* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1760 285 Gene3D - 91 285 IPR008972 -
Vvi18g1760 285 ProSitePatterns Multicopper oxidases signature 2. 248 259 IPR002355 GO:0005507
Vvi18g1760 285 PANTHER MULTI-COPPER OXIDASE 1 273 IPR045087 -
Vvi18g1760 285 CDD CuRO_3_LCC_plant 129 268 IPR034289 GO:0005507
Vvi18g1760 285 ProSitePatterns Multicopper oxidases signature 1. 243 263 IPR033138 -
Vvi18g1760 285 SUPERFAMILY Cupredoxins 96 285 IPR008972 -
Vvi18g1760 285 Pfam Multicopper oxidase 158 268 IPR011706 GO:0005507|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1760 Vvi-Chr18 23928437 23929434 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1760 K05909 - vvi:100855386 607.06