Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1759 ATGAAAGGAGAGACAATCATTGTCGACGTTTATAACAGGGGAAAAGAAAACATCACCATTCACTGGCATGGGGTGAACATGCCTAGATATCCATGGACAGATGGTCCTGAGTATATCACACAATGCCCAATTCAGCCAGGGTCAAAGTTTAGTCAGAAGATCATCCTTTCCTCTGAGGAAGGCACTTTATGGTGGCATGCTCACAGTGATTGGACCCGAGCCACCGTTCATGGAGCTATAATCATTTATCCCAAGAATGGAACCAAGTATCCTTTTCACAAACCTAACGCAGAATCTCTCATCATATTAGGACAATGGTGGAAGAGTGATGTGAATGCGGTTCGAGATGAAGTGCTTGCAGTCGGAGCTGATGGCAATGCCTCTAATTCTTTATTGATAAATGGACAACCTGGTGATCTACTTCCATGCTCAAAATCAAGTACAAATTAA 450 0.4289 MKGETIIVDVYNRGKENITIHWHGVNMPRYPWTDGPEYITQCPIQPGSKFSQKIILSSEEGTLWWHAHSDWTRATVHGAIIIYPKNGTKYPFHKPNAESLIILGQWWKSDVNAVRDEVLAVGADGNASNSLLINGQPGDLLPCSKSSTN* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1759 149 Gene3D - 1 147 IPR008972 -
Vvi18g1759 149 PANTHER MULTI-COPPER OXIDASE 2 145 IPR045087 -
Vvi18g1759 149 Pfam Multicopper oxidase 2 86 IPR011707 GO:0005507
Vvi18g1759 149 SUPERFAMILY Cupredoxins 2 108 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1759 Vvi-Chr18 23927109 23927909 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1759 K05909 - vvi:100855386 318.546