Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1751 ATGGCCTCTTCAATGATCAACCAAAAAGATTCTGCTTCTCACTGGAATTATGACGTGTTCCTGAGTTTCAGAGGTGAAGACACCCGCAGGAGTTTTACCGATCATCTCTATGCTGCTTTGGTTGAGAAAGGGGTTCGCACTTTTAGAGATGACGAAGAACTTGAGAGAGGAAAAGAGATTGCACCAGAGCTTTTGAAAGCTATCGAAGAATCAAGAATTTCCGTGGTGGTTTTCTCCAAGAATTATGCTCGTTCGGGGTGGTGTATGGATGAGCTAGTGAAGATCATTGAGTGCATGAAAGCGAAGGGACAGACAGTTCTTCCAGTTTTCTATGATGTGGATCCGACCCATGTCCGGAAGCAGACTGGGAGTTTCATGGAAGCATTTGCTAGTCATGGAGAAGACACAGAGGTGATAGAGAGGGCTAAAAGGTGGAGAGCTGCCTTGACTCAAGCAGCCAATTTATCTGGATGGCACCTGCAGAATGGGTAA 492 0.4573 MASSMINQKDSASHWNYDVFLSFRGEDTRRSFTDHLYAALVEKGVRTFRDDEELERGKEIAPELLKAIEESRISVVVFSKNYARSGWCMDELVKIIECMKAKGQTVLPVFYDVDPTHVRKQTGSFMEAFASHGEDTEVIERAKRWRAALTQAANLSGWHLQNG* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1751 163 Gene3D - 11 163 IPR035897 -
Vvi18g1751 163 PANTHER TMV RESISTANCE PROTEIN N-LIKE 11 162 - -
Vvi18g1751 163 Pfam TIR domain 16 151 IPR000157 GO:0007165
Vvi18g1751 163 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 158 IPR035897 -
Vvi18g1751 163 SMART till_3 16 155 IPR000157 GO:0007165
Vvi18g1751 163 ProSiteProfiles TIR domain profile. 15 163 IPR000157 GO:0007165
Vvi18g1751 163 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1751 Vvi-Chr18 23701169 23701660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1751 17 157 Miscellaneous Gene Families AT5G44900 38.356 8.44e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1751 - - vvi:100264833 332.028