Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1717 ATGATCAATGCTGCCTTGCATGAGCCTTTCTTCTTCTCCATTGCCAAGCATAAAATGACAGTGGTTGGAACAGATGGTAGCTACACGAAACCATTGACACAAGATTATATCACAATATTTCCTGGCCAAACCTTTGATGTCTTACTAGAAGCTAACCAACGCCCGGATCACTATTACATGGCGGCTATAGCTTTTTCCCTTGCCCCGGCAAGTCGTAATATTTATGATAACACAACCACCACAGCTATTGTACAGTACAGGGGATACTACACTCCATCTTCACCTCCCTTCTTGCCTCATTTACCTGCATACAATGACACAAATGCATCGGTTCAGGTCATGGCCAGCCTCCGAAGCTTAGTAGATGCGGAACATCCTTGCAATGTCCCATTGAGCACGAGCACTAAACTGATTTACACTGTTTCTTTAAACTCGTACCCATGCGTCAATGATTCATGTGAAGGGCCAAATGGGACACGATCTGCCGCAAGTATAAACAACATAAGCTTCCATACCCCTACAATTGACATATTGGAAGCTTACTATTATAACATTAGTGGTGTATATGAAGATAACTTTCCTAGCGTTCCACCAGTGGTGTTTGATTTTACAGCTGATTATCTTCCATTACTCTATCAGTTGCCGAGCACTGGAACAAAAGTAAGGGTGCTCGAGTATAACTCCACAGTGGAGATTGTTTTTCAAGGGACAAACTTGGTTGGAGGGGCAATCCACCCCATGCATCTCCATGGACACAGTTTCTATGTTGTTGGATGGGGATTTGGGAATTTCGATGAAAATAGGGATCCTATGCGTTACAATCTGGTGGATCCTCCCCATCATAATACCATCTCTGTTCCTAAGAATGGTTGGGTTGCAATCAGATTTAAGGCCTCCAACCCTGGAGTGTGGTTCATGCACTGCCATATAGAAGACCATTTGACTTGGGCCATGGCAACTGTGTTCATAGTGAAAAATGGTAAACACCCAAAAGCTCAAATGCTGCCTCCTCCATCCGACATGCCACCATGTTGA 1035 0.4396 MINAALHEPFFFSIAKHKMTVVGTDGSYTKPLTQDYITIFPGQTFDVLLEANQRPDHYYMAAIAFSLAPASRNIYDNTTTTAIVQYRGYYTPSSPPFLPHLPAYNDTNASVQVMASLRSLVDAEHPCNVPLSTSTKLIYTVSLNSYPCVNDSCEGPNGTRSAASINNISFHTPTIDILEAYYYNISGVYEDNFPSVPPVVFDFTADYLPLLYQLPSTGTKVRVLEYNSTVEIVFQGTNLVGGAIHPMHLHGHSFYVVGWGFGNFDENRDPMRYNLVDPPHHNTISVPKNGWVAIRFKASNPGVWFMHCHIEDHLTWAMATVFIVKNGKHPKAQMLPPPSDMPPC* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1717 344 Gene3D - 1 123 IPR008972 -
Vvi18g1717 344 Gene3D - 149 344 IPR008972 -
Vvi18g1717 344 CDD CuRO_3_LCC_plant 188 327 IPR034289 GO:0005507
Vvi18g1717 344 SUPERFAMILY Cupredoxins 1 123 IPR008972 -
Vvi18g1717 344 SUPERFAMILY Cupredoxins 155 344 IPR008972 -
Vvi18g1717 344 Pfam Multicopper oxidase 215 327 IPR011706 GO:0005507|GO:0016491
Vvi18g1717 344 Pfam Multicopper oxidase 2 88 IPR001117 -
Vvi18g1717 344 ProSitePatterns Multicopper oxidases signature 2. 307 318 IPR002355 GO:0005507
Vvi18g1717 344 PANTHER MULTI-COPPER OXIDASE 1 332 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1717 Vvi-Chr18 23015960 23017132 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1717 K05909 - vvi:100268050 726.472