Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1709 ATGTGGCTAATCATGAAGGTTTTCCTCTTACAAATTTTAGTGTTTCAACTTTTTGGTGGTGGCATCCATTGCCAAGCTTCAACCAGTCGACATACTTTTGTGGTGAGGGAAGCTTCATATACAAGGCTTTGTAGCACCAAGGACATCTTAACAGTAAATGGACAATTTCCGGGACCAACTATATATGCTATGAAAGGAGAGACGATCATTGTCGATGTTTATAACAGGGGAAAAGAAAATGTCACCATTCACTGGTACAAATTAAGTTTAACTTCCCATTTTAAAATTGTACATGATTTCATTTTTTTGTATGTTGACCATATTACTTTTTCTTATTAG 339 0.354 MWLIMKVFLLQILVFQLFGGGIHCQASTSRHTFVVREASYTRLCSTKDILTVNGQFPGPTIYAMKGETIIVDVYNRGKENVTIHWYKLSLTSHFKIVHDFIFLYVDHITFSY* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1709 112 Pfam Multicopper oxidase 35 88 IPR011707 GO:0005507
Vvi18g1709 112 Gene3D - 21 106 IPR008972 -
Vvi18g1709 112 PANTHER MULTI-COPPER OXIDASE 28 85 IPR045087 -
Vvi18g1709 112 SUPERFAMILY Cupredoxins 26 91 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1709 Vvi-Chr18 22877730 22879029 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1709 K05909 - vvi:100259479 176.022