Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi18g1705 | ATGACTCTCATTTTCCATCGTAGGACCCCTTACCCCGGTGCCGTTGAGTCATTCATGCATGCTATCAATTTTAAGTGGTTATACACTTGCATGAATGGATCGATGCAATTATTCATGCATGGGGTGAACATGCCTAGATATCCATGGACAGATGGTCCCGAGTATATCACACAATGCCCAATTCAGCCAGGGTCAAAGTTTAGTCAGAAAATCATCCTTTCCTCCGAGGAAGGCACTTTATGGTGGCATGCTCACAGTGATTGGACCCGAGCCACCGTTCATGGAGCTATAATTGTTTATCCCAAGAATGAAACCATGTATCCTTTTCATAAACCTAATGCAGAAGTTCTCATCATATTAGGTATAAGTGTTGTTAGTTTTAAATGTTAA | 390 | 0.4154 | MTLIFHRRTPYPGAVESFMHAINFKWLYTCMNGSMQLFMHGVNMPRYPWTDGPEYITQCPIQPGSKFSQKIILSSEEGTLWWHAHSDWTRATVHGAIIVYPKNETMYPFHKPNAEVLIILGISVVSFKC* | 130 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi18g1705 | 129 | Gene3D | - | 4 | 115 | IPR008972 | - | |
| Vvi18g1705 | 129 | PANTHER | MULTI-COPPER OXIDASE | 35 | 120 | IPR045087 | - | |
| Vvi18g1705 | 129 | SUPERFAMILY | Cupredoxins | 37 | 121 | IPR008972 | - | |
| Vvi18g1705 | 129 | Pfam | Multicopper oxidase | 34 | 103 | IPR011707 | GO:0005507 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi18g1705 | Vvi-Chr18 | 22766637 | 22767492 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi18g1705 | K05909 | - | vvi:100245728 | 184.496 |