Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1703 ATGAAGGTTTTCCTCTTACAAATTTTAGTGTTTCAACTTTTTGGTGGTGGCATCCATTGCCAAGCTTCAACCGGCACATTCAAGCTAACAGTGGATCATGGAAAGACTTATCTACTTCGCATAATCAATGCTGCCTTGCAAGAGGCTCTCTTCTTCTCCATTGCTAAGCATAAAATGACAGTGGTTGGAACAGATGGTAGCTACACGAAACCATTGCCATGA 222 0.4189 MKVFLLQILVFQLFGGGIHCQASTGTFKLTVDHGKTYLLRIINAALQEALFFSIAKHKMTVVGTDGSYTKPLP* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1703 73 PANTHER MULTI-COPPER OXIDASE 20 72 IPR045087 -
Vvi18g1703 73 Gene3D - 12 73 IPR008972 -
Vvi18g1703 73 Pfam Multicopper oxidase 19 72 IPR001117 -
Vvi18g1703 73 SUPERFAMILY Cupredoxins 19 72 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1703 Vvi-Chr18 22713704 22715312 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1703 K05909 - vvi:100251785 102.834