Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1691 ATGGCTTCTTTATCTTCATCTTCATCTTCTACACATCAATGGAAGTACGACGTGTTCCTGAGTTTCAGAGGGGAAGACACCGGCAAAAGCTTCACTGACCATCTTCATAGAGCTCTGTTTCAAAGAGGAGTCAAGACTTTCATGGATGACAAGCTCAGTAGAGGGCAAGAGATCTCTCCAGCACTTGTAAAAGCAATCGAAGAGTCCAGATTCTCCGTCATCGTTTTCTCTGAAAATTATGCTTCTTCAACATGGTGTCTGGAGGAACTTGTCAAGATTATTGACTGCACCAAAGTGATGGGACATGCAGCTTTACCAGTTTTCTACAATGTGGATCCCTCTCATGTGAGGAAACAGACAGGGAGTTTTGCACAAGCATTTGCTAAGCATGAAGAGGTTTATAAGGAGCAGATGGAGAAAGTGATCAAGTGGAGAGTGGCTTTGACTGAAGCTGCCAATATTTCTGGATGGGATTCTCGAGATGGGTATTTTTAA 495 0.4303 MASLSSSSSSTHQWKYDVFLSFRGEDTGKSFTDHLHRALFQRGVKTFMDDKLSRGQEISPALVKAIEESRFSVIVFSENYASSTWCLEELVKIIDCTKVMGHAALPVFYNVDPSHVRKQTGSFAQAFAKHEEVYKEQMEKVIKWRVALTEAANISGWDSRDGYF* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1691 164 ProSiteProfiles TIR domain profile. 14 164 IPR000157 GO:0007165
Vvi18g1691 164 Gene3D - 9 163 IPR035897 -
Vvi18g1691 164 SMART till_3 15 154 IPR000157 GO:0007165
Vvi18g1691 164 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 163 - -
Vvi18g1691 164 PANTHER TMV RESISTANCE PROTEIN N-LIKE 9 161 - -
Vvi18g1691 164 Pfam TIR domain 15 152 IPR000157 GO:0007165
Vvi18g1691 164 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 157 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1691 Vvi-Chr18 22496487 22496981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1691 1 156 Miscellaneous Gene Families AT5G45220 30.864 1.63e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1691 - - vvi:109121575 323.553