Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1684 ATGAAGCAAGCCACTTCTACATTGAGAGGATGCATCAGCACAAGATGCTCAAACTTGAAAGGCACATTCAAGCTAACGGTGGATCATGGAAAGACATATCTACTTCGCATAATCAATGCTGCCTTGCACGAGGCTCTTTTCTTTGCCATTGACAAGCATAAAATGACAGTGGTTGGAACAGATGGTAGCTACACGAAACCATTGACACGAGATTATATCACAATATTTCCTGGCCAAACCTACGATGTCTTACTAGAAGCTAACCAACGCCCAGATCAATATTACATGGCGGCTATAACTTATTCTGTTGCCCCTCAATATCAAAACTTTTATGATAACACAACCACCACAGCTATTGTACAGTACAGGGGATACTACACTCCATCTTCACCTCCCTCCTTGCCTTATCTTCCTGCATACAATGACACAAATGCATCGGTTCAGGTCATGGCCGGCCTCCGAAGCTTAGCAGATGCGGAACATCCTTGCAATGTCCCATTGAGCACGAGCACTAACCTGTTTTACATTCTTTCTATGAACTCGTACCCATGCGTCAATGATTCATGTGCAGGGCCCAATGGGACGCGGTTCTCCTCAAGTATAAACAACATAACCTTCGATTTGCCTACAATTGACATATTGGAAGCTTACTATTTTAACATCAGTGGTGTATATGGAAATAACTTTCCTAGCTTTCCATCATTTGTGTTCGATTTTACATATGATTATCTTCCATTAACCTATCAGTTGCCGAGTAGCGGAACAGAAGTAAGGGTGCTCGAGTATAACTCCACAGTGGAGATTATTTTTCAAGGGACAGCCGTGCTTGCAGAGACACATCACCCCATGCATCTCCATGGATACAGTTTCTATGTTGTTGGATGGGGATTTGGGAATTTCGATGGAAATAGGGACCCTTTGCGCTATAATCTGGTGGATCCTCCTCTTCAGAATACCATTTCTGTTCCTTCGAAAGGTTGGGTTGCAATCAGATTCGAGGCATCCAATCCTGGAGTATGGTTCATGCACTGCCATGTAGAACGCCATCTGACTTGGGGCATGGAAACTGCGTTCATAGTGAAAAATGGTAAACACCCAGAAGCTCAAATGCTGCCTCCTCCATCCGACATGCCACCATGTTGA 1143 0.4392 MKQATSTLRGCISTRCSNLKGTFKLTVDHGKTYLLRIINAALHEALFFAIDKHKMTVVGTDGSYTKPLTRDYITIFPGQTYDVLLEANQRPDQYYMAAITYSVAPQYQNFYDNTTTTAIVQYRGYYTPSSPPSLPYLPAYNDTNASVQVMAGLRSLADAEHPCNVPLSTSTNLFYILSMNSYPCVNDSCAGPNGTRFSSSINNITFDLPTIDILEAYYFNISGVYGNNFPSFPSFVFDFTYDYLPLTYQLPSSGTEVRVLEYNSTVEIIFQGTAVLAETHHPMHLHGYSFYVVGWGFGNFDGNRDPLRYNLVDPPLQNTISVPSKGWVAIRFEASNPGVWFMHCHVERHLTWGMETAFIVKNGKHPEAQMLPPPSDMPPC* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1684 380 CDD CuRO_3_LCC_plant 224 363 IPR034289 GO:0005507
Vvi18g1684 380 CDD CuRO_2_LCC_plant 16 122 IPR034285 -
Vvi18g1684 380 ProSitePatterns Multicopper oxidases signature 2. 343 354 IPR002355 GO:0005507
Vvi18g1684 380 PANTHER MULTI-COPPER OXIDASE 15 368 IPR045087 -
Vvi18g1684 380 SUPERFAMILY Cupredoxins 191 380 IPR008972 -
Vvi18g1684 380 Pfam Multicopper oxidase 21 124 IPR001117 -
Vvi18g1684 380 SUPERFAMILY Cupredoxins 18 159 IPR008972 -
Vvi18g1684 380 ProSitePatterns Multicopper oxidases signature 1. 338 358 IPR033138 -
Vvi18g1684 380 Gene3D - 185 380 IPR008972 -
Vvi18g1684 380 Pfam Multicopper oxidase 252 363 IPR011706 GO:0005507|GO:0016491
Vvi18g1684 380 Gene3D - 1 159 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1684 Vvi-Chr18 22386686 22393431 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1684 K05909 - vvi:100266290 747.658