Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1683 ATGCATAGCCACAATTATCGTATTCCTGACCCCTTTCGAGATCTGGTTGTAATTTTGAGAGGGGTTGGTTCAAGTGCTCTTGATATCTCTATGAACATTGCTCAAGTTGCCAAAGAAGTTCACATTGCATCTAGATCAACCAAGGTTGGAGTCTTGGGAAACATGTTTGGCTATGATAATTTGAGGTTGCATCCTATGATAGAAAGCATCCACAGGGACGGCTTTATGATATTTAATGATGGGAGTGTGGTTTTTTGCCGATGTTATTCTGCATTGCACAGGATACAAGTATCATTTCCCTTTTCTTGA 309 0.4013 MHSHNYRIPDPFRDLVVILRGVGSSALDISMNIAQVAKEVHIASRSTKVGVLGNMFGYDNLRLHPMIESIHRDGFMIFNDGSVVFCRCYSALHRIQVSFPFS* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1683 102 Pfam Flavin-binding monooxygenase-like 1 47 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vvi18g1683 102 SUPERFAMILY FAD/NAD(P)-binding domain 1 84 IPR036188 -
Vvi18g1683 102 Gene3D - 1 86 IPR036188 -
Vvi18g1683 102 PANTHER DIMETHYLANILINE MONOOXYGENASE 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1683 Vvi-Chr18 22332218 22346849 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1683 - - vvi:100852623 152.14