Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1679 ATGGCCGGCCTCCGAAGCTTAGCAAATGCGGAACATCCTTGCAATGTCCCATTGAGCACGAGCACTAAGTTGTTTTACACTCTTTCTATGAACTCGTACCCATGCGTCAATGATTCATGTGCAGGGCCAAATGGGACGCGGTTCTCCTCAAGTATAAACAACATAAGCTTCCATACCCCTACGGTTGACATACTGGAAGCTTACTATTATAACATCAGTGGTGTATATGGAAATAACTTTCCTAGCTTTCCACCACTAGTGTTCGATTTTACATATGATTATCTTCCATTAATCTATCAGTTGCCGAGCAGTGGAACAGAAGTAAGGGTGCTCGAGTATAACTCCACAGTGGAGATTGTTCTTCAAGGGACAGCCGTGCTTGCAGAGACACACCACCCTATGCATCTCCATGGATACAGTTTCTATGTTGTTGGATGGGGATTTAGGAATTTCGATGAAAATAGGGACCCTTTGCACTATAATTTGGTGGATCCTCCCCTTCAGAATACCATCTCTGTTCCTTCGAAAGGTTGGGTTGCAATCAGATTCAAGGCATCCAACCCTGGAGTGTGGTTCCTGCATTGCCATGTAGAACGCCATGTGACTTGGGGCATGGAAACTGCATTCATAGTGAAAAATGGTAAACACCCAGAAGCTCAAATGCTGCCTCCTCCATCCGACATGCCACCATGTTGA 696 0.4526 MAGLRSLANAEHPCNVPLSTSTKLFYTLSMNSYPCVNDSCAGPNGTRFSSSINNISFHTPTVDILEAYYYNISGVYGNNFPSFPPLVFDFTYDYLPLIYQLPSSGTEVRVLEYNSTVEIVLQGTAVLAETHHPMHLHGYSFYVVGWGFRNFDENRDPLHYNLVDPPLQNTISVPSKGWVAIRFKASNPGVWFLHCHVERHVTWGMETAFIVKNGKHPEAQMLPPPSDMPPC* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1679 231 ProSitePatterns Multicopper oxidases signature 2. 194 205 IPR002355 GO:0005507
Vvi18g1679 231 ProSitePatterns Multicopper oxidases signature 1. 189 209 IPR033138 -
Vvi18g1679 231 Gene3D - 36 231 IPR008972 -
Vvi18g1679 231 Pfam Multicopper oxidase 104 214 IPR011706 GO:0005507|GO:0016491
Vvi18g1679 231 SUPERFAMILY Cupredoxins 26 231 IPR008972 -
Vvi18g1679 231 PANTHER MULTI-COPPER OXIDASE 4 219 IPR045087 -
Vvi18g1679 231 CDD CuRO_3_LCC_plant 75 214 IPR034289 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1679 Vvi-Chr18 22181940 22182770 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1679 K05909 - vvi:100261086 492.656