Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1678 ATGACAGTGGTTGGAACAGATGGTAGCTACACGAAACCATTGACACGAGATTTTATCACAATATTTCCTGGCCAAACCTACGATGTCTTACTAGAAGCTAACCAACGCCCGGATCACTATTACATGGCAGCTATAACTTATTCTGTTGCCCCGAAATATCAAGATTTTTATGATAACACAACCACCACAGCTATTGTACAGTACAACGGATACTACACTCCATCTTCGCCTCCATCCTTCCCTCTTCTTCCTGCATACAATGACACAAATGCGTCGGTTCAGGTCATGGCCGGCCTTCGAAGCTTAGTAGATGCGGAACATCCTTGCAATGTCCCATTGAGCACAAGCACTAACCTGATTTACACTGTTTCTGTAAACTCGTACCCATGCGTCAATAATTCATGTGCAGGGGCCAATGGGACGCGGTTCTCCTCAAGTATAAACAACATAAGCTTCGATACCCCTACAGTTGACATACTACAAGCTTACTATTATAACATCAGTGGTGTTTATGGAGATAAATTTCCTAGCGATCTACCACTGGTGTTCGATTTTACAGCTGATTATCTTCCATTAATCTATCAGTTGCCAAGCAGCGGAACAGAAGTAAGGGTGCTCGAGTATAACTCCACAGTGGAGATTGTTTTTCAAGGGACAAACGTGCTTGCAGCAACACACCACCCCATGCATCTCCATGGATACAGTTTCTATGTTGTTGGATGGGGATTTGGGAATTTCGATGGAAATAAGGACCCTTTACGCTATAATTTGGTGGATCCTCCCTTTCAGAATACCATCTCCGTTCCTTCGAATGGTTGGGTTGCAATCAGATTTGAGGCATCCAACCCTGGAGTGTGGTTCATGCACTGCCATGTAGAACGCCATCTGACTTGGGGCATGGAAACTGCGTTCATAATGAAAAATGGTAAACACCCGGAAGCTCAAATGCTGCCTCCTCCGTCGGACATGCCACCATGTTGA 981 0.4475 MTVVGTDGSYTKPLTRDFITIFPGQTYDVLLEANQRPDHYYMAAITYSVAPKYQDFYDNTTTTAIVQYNGYYTPSSPPSFPLLPAYNDTNASVQVMAGLRSLVDAEHPCNVPLSTSTNLIYTVSVNSYPCVNNSCAGANGTRFSSSINNISFDTPTVDILQAYYYNISGVYGDKFPSDLPLVFDFTADYLPLIYQLPSSGTEVRVLEYNSTVEIVFQGTNVLAATHHPMHLHGYSFYVVGWGFGNFDGNKDPLRYNLVDPPFQNTISVPSNGWVAIRFEASNPGVWFMHCHVERHLTWGMETAFIMKNGKHPEAQMLPPPSDMPPC* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1678 326 ProSitePatterns Multicopper oxidases signature 2. 289 300 IPR002355 GO:0005507
Vvi18g1678 326 Gene3D - 129 326 IPR008972 -
Vvi18g1678 326 SUPERFAMILY Cupredoxins 136 326 IPR008972 -
Vvi18g1678 326 PANTHER MULTI-COPPER OXIDASE 1 314 IPR045087 -
Vvi18g1678 326 CDD CuRO_3_LCC_plant 170 309 IPR034289 GO:0005507
Vvi18g1678 326 ProSitePatterns Multicopper oxidases signature 1. 284 304 IPR033138 -
Vvi18g1678 326 Pfam Multicopper oxidase 196 308 IPR011706 GO:0005507|GO:0016491
Vvi18g1678 326 SUPERFAMILY Cupredoxins 1 105 IPR008972 -
Vvi18g1678 326 Gene3D - 1 105 IPR008972 -
Vvi18g1678 326 Pfam Multicopper oxidase 1 70 IPR001117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1678 Vvi-Chr18 22160235 22161356 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1678 K05909 - vvi:100242381 676.396