Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1677 ATGTCTTACATTTTTCCTACCATTTATCACATTGTTCGTACATTTCCTTGTTTTGTTTGTACTCTTTCTCATAGTGTGAGGGAAGCTTCATATAAAAGGCTTTGTAGCACCAAGAACATCTTAACAGTAAATGGAAAATTTCCGGGACCAACCATATATGCTACGAAAGGAGAGACGATCATTGTCGACGTTTATAACAAGGGAAACGAAAACATCACCATTCATTGGTAG 231 0.368 MSYIFPTIYHIVRTFPCFVCTLSHSVREASYKRLCSTKNILTVNGKFPGPTIYATKGETIIVDVYNKGNENITIHW* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1677 76 Gene3D - 17 76 IPR008972 -
Vvi18g1677 76 PANTHER MULTI-COPPER OXIDASE 23 76 IPR045087 -
Vvi18g1677 76 SUPERFAMILY Cupredoxins 25 76 IPR008972 -
Vvi18g1677 76 Pfam Multicopper oxidase 26 76 IPR011707 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1677 Vvi-Chr18 22143047 22151522 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1677 K05909 - vvi:100257763 110.538