Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1667 ATGGAAGATGAAGGGAATTTGAACAAGTTCAGAGTTGGCCCTCACCCAACCTTGTTTTACATTCCTGATTTCATCACAGACTACCAACAAACTCAGCTCCTCAATAATATTTACCAAGCCCCAGTGTCCAAGTGGAAATCTTTGAAGAATAGGAGATTACAGAACTGGGGAGGTGTTGTCCATGAGAAGGGTCTTCTCTCTCAAGATTTGCCTACTTGGCTAACAAGGATTACAGAAAGGATATTTGAAGAGTCAGGGCTCTTCCCCTCAGCAATTAATCATGTGCTAATCAACGAATACCTTCCTAACCAAGGAATAATGCCACACCAGGATGGGCCTGCTTATTTTCCGGTAGTAGCAATTTTGTCTCTTGGGTCTCCTGTTGTTATGGACTTCACCCCTCATTCAAGATTAAGATTAGACACAAATGATGCAGAGGATAAAAATTCAGATGACAAAAGCTTCGAGATTGAGACTAAGAAATGGTTGGATGATCATCATCCTTTTTCCATTCTATTGATGCCTCGTAGTTTGCTGATATTTAAGGATGAGATGTTCTCAGAGTACTTGCATGGTATAAAAGATAGCGAGGTGCAGCAGTATGATAAAGTAGTTAATGATATTGAAGCATTGGAACAACATAGGCTAGATCCATTGTTTTCAGGCTCAGAGAAAGCAGTTGAAGTAATGAGAAATGGCGAACTCAGGAGTATCCAGAGAACAACCACCAGAATTTCATTGACGTGCCGATTGGTATTAAAGGTTCACAAAAATTTGTTCAAGTTTTAG 789 0.4005 MEDEGNLNKFRVGPHPTLFYIPDFITDYQQTQLLNNIYQAPVSKWKSLKNRRLQNWGGVVHEKGLLSQDLPTWLTRITERIFEESGLFPSAINHVLINEYLPNQGIMPHQDGPAYFPVVAILSLGSPVVMDFTPHSRLRLDTNDAEDKNSDDKSFEIETKKWLDDHHPFSILLMPRSLLIFKDEMFSEYLHGIKDSEVQQYDKVVNDIEALEQHRLDPLFSGSEKAVEVMRNGELRSIQRTTTRISLTCRLVLKVHKNLFKF* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1667 262 Pfam 2OG-Fe(II) oxygenase superfamily 52 250 IPR027450 -
Vvi18g1667 262 SUPERFAMILY Clavaminate synthase-like 16 253 - -
Vvi18g1667 262 Gene3D - 7 258 IPR037151 -
Vvi18g1667 262 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 91 253 IPR005123 -
Vvi18g1667 262 PANTHER ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 6 4 262 IPR032862 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1667 K10768 - vvi:100252488 536.954