Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1656 ATGTATATTCTAGATATTAGCTTAGAATTAACATATTCTACTTTGATTCTAGGTAACAGAGATGACATAGAAGAAAAGTCAAACAACAGCTCAGTTTTCTTACAACGCTCAATTCCTGAGATATATAGGTTGGTTGCTAAAACCAAGGGAGTTTTTATCAACCCTGCTCTTGTGGAGCCATTTGGTCTCACACTTATAGAGGCAGCTGCTTATGGTTTACCTGTTGTTGCTACAAAAAATAGTGGGCCTGTGGATATTATCAAGGCACAAAACAATGGCCTCCTTGTTGACCCACATGACCAGAAAGGCATAGCAGATGCCCTTCTAAAGCTCCTTGCTGATAAGAACTTATGGTTTGAGTGCCGTAAAAATGAGCTAAAGAACATCCACCGGTTTTCATGGCCGAAACACTGTCGTATGACTCCCTAA 429 0.4009 MYILDISLELTYSTLILGNRDDIEEKSNNSSVFLQRSIPEIYRLVAKTKGVFINPALVEPFGLTLIEAAAYGLPVVATKNSGPVDIIKAQNNGLLVDPHDQKGIADALLKLLADKNLWFECRKNELKNIHRFSWPKHCRMTP* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1656 142 Gene3D Glycogen Phosphorylase B; 35 133 - -
Vvi18g1656 142 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 30 139 - -
Vvi18g1656 142 PANTHER SUCROSE-PHOSPHATE SYNTHASE 3-RELATED 35 139 - -
Vvi18g1656 142 Pfam Glycosyl transferases group 1 24 123 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1656 Vvi-Chr18 21737277 21739446 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1656 9 139 Glycosyltransferase AT4G10120 67.532 9.20e-65 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1656 K00696 - vvi:100232974 216.853