Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1655 ATGGCTTCCTCTAATGGCAATTCTAGCGTTAGCTATCATTCAGGAAGAAGGCAAGGGCTATTTGTAATAGCAGCAGATTGTTATGATAGCAATGGAGATTGCACTGAGAGATTACCAACAATTATAAAAAATGTGATGAAATCTACAAGCTCTGGTTTAGGCCGAATAGGATTTGTATTGTTGACTGGTTTGAGTTTACAGGAGATATTAGAGAAGTTAAGGTGTTGCCAAGTGAACTTGGAAGAAATTGATGCATTGGTTTGTAATAGTGGGATTGAAATTTACTATCCATGGAGGGATTTGATAGCTGATTTGGAGTATGAAGCCCACGTGGAGAATCGGTGGCCTGGTGAGAGTGTTAGATCAGTAGTGACGAGGCTTGCTCAGGGAGAAGGGGGGGCTGAGGATGACATTGTGGAGTATGCAGGTGTGTGTAGTACAAGGTGCTACTCTTATGGAGTGAAACCAGGAGCTAAGACTCGGAGAATTGATGACTTGCGCCAAAGGATGTGGATGAGAGGCTTCCGTTGCAACCTTGTCTATACACATGCTACATCAAGGTTGAATGTGCATCAAGGGCCCAAGCACTAA 591 0.4332 MASSNGNSSVSYHSGRRQGLFVIAADCYDSNGDCTERLPTIIKNVMKSTSSGLGRIGFVLLTGLSLQEILEKLRCCQVNLEEIDALVCNSGIEIYYPWRDLIADLEYEAHVENRWPGESVRSVVTRLAQGEGGAEDDIVEYAGVCSTRCYSYGVKPGAKTRRIDDLRQRMWMRGFRCNLVYTHATSRLNVHQGPKH* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1655 196 PANTHER SUCROSE-PHOSPHATE SYNTHASE 3-RELATED 9 190 - -
Vvi18g1655 196 Pfam Sucrose-6F-phosphate phosphohydrolase 55 184 IPR006380 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1655 Vvi-Chr18 21736489 21737166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1655 1 190 Glycosyltransferase AT4G10120 59.375 1.19e-74 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1655 K00696 - vvi:100232974 367.081