Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1654 ATGGTGGTGTTTGTTGGGGAAAAAAGGGATACAGATTATGAAGACCTGCTTGTTGGCCTGCACAAGACCATCATTCTCAGAGGTTTAGTGGAGTATGGCAGTGAGAAGCTTCTTCGCCATGAAGACAGTTTCAAAAGGGAGGACATGATCCCACAAGATAGTCCTAACATTGCCTTCGAGGAGGAGGGTTATGAGGCTCTTGATATCTCAGCAGCTCTACTGACTCTCAGGATCAAGTGA 240 0.4625 MVVFVGEKRDTDYEDLLVGLHKTIILRGLVEYGSEKLLRHEDSFKREDMIPQDSPNIAFEEEGYEALDISAALLTLRIK* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1654 79 Coils Coil 69 79 - -
Vvi18g1654 79 PANTHER SUCROSE-PHOSPHATE SYNTHASE 3-RELATED 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1654 Vvi-Chr18 21736139 21736378 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1654 2 79 Glycosyltransferase AT4G10120 58.974 8.92e-24 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1654 K00696 - vvi:100232974 143.28