Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1623 ATGGCTCCACCAATTCTTTGCTCACAATTATGCCCCATGAATGTGTTCCCTTGTTGGAAGTGGATTCTAGAGCCCAAGGATGCATTTGTCTCTCTGTGGCACTTTATCTGCAAGTTGGCACCTCAAGAAGGTGAACACGTTCCCCTAGAAAAGGCTCCGGACATGTTCTGTAAAGGAATATCAGAATATGGCCCATATTGGGACCATGTTGTAAGGTATTGGAAGGCAAGCCTGGAATGTCCTGAGAGAGTACTGTTCCTGAAATATGAAGGTGTGACAAACCAACTCTTTTTGACAATGGATATGTTTAGTAAATTAGTTTTATCAGTAATAAGCTTCTCGGTATCAAATTTTGACCGCTTACTTCATAGGCCTTCTGAAACTCAGCAATGCTCTTCATTTGAGTCTCTTTAA 414 0.4155 MAPPILCSQLCPMNVFPCWKWILEPKDAFVSLWHFICKLAPQEGEHVPLEKAPDMFCKGISEYGPYWDHVVRYWKASLECPERVLFLKYEGVTNQLFLTMDMFSKLVLSVISFSVSNFDRLLHRPSETQQCSSFESL* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1623 137 Pfam Sulfotransferase domain 25 96 IPR000863 GO:0008146
Vvi18g1623 137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 96 IPR027417 -
Vvi18g1623 137 Gene3D - 23 105 IPR027417 -
Vvi18g1623 137 PANTHER SULFOTRANSFERASE SULT 24 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1623 Vvi-Chr18 20989369 20993698 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1623 - K22312 vvi:100246633 137.887