Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1618 ATGGAGCAGAAAAATTTCAAAGTGAGTGTAATGACAAGTAATGTGAGGCACCTCCATGATCAGCAAAAGCTAGAAACTTTTGGGAATTTGAAGAACTCATTTGATTGTTATGGAAAATATTCTCATGGGAACACTGAAATTGAGAAGCAAGAGCATGAATCTGACCCTGAAATTAACAGTTACGAAGCTGTTAGTTTGACCGAAATGGAAATTAAGTGCCTAAATTATGATTATGTCTCTTCCAGTGATTGTATCACCACAGATGCAAACAATTCAAAGCAACTATGTTCTGCAGTTTCAACTTCAAGAAGTTCAACAGTTGGGGTTGGAATATATAAACACGGTGGTGCTGAAGGAACTTCTGGTGAAATGGTTTGTAATAAAGTAGTTCCATCTTCAACTTGTCAGAATAGGTTTGCTGGAAATGAGTGCTCAAATGATGGTGAGACATCTGCCCATTTTATTGGAGGGATCGATTCTGTGCAGCAGATTTGCATAAATAGTGGCATTAAGTTAGAGACTGGCCAGCCTCTTAAAAAGGAAGTCAATGAGTTGGATCTAGGGAGAAGAAAAGGAAATTTGCTAAATGCTGATGAGGATGTTTTAAAGTCCATTGTGCAGGCAACCTTTCATGATAAGCAACTTAAAACAGAGTCATCCTCTTCTAACTCATCGCATGTCTTTCTTCCAGCTTCTTCAAATGACAGCTGTCAGGAACCATCACTGGATGTGAAGTCCTGTAAGCACAGCAAAAGTAGTGGCATGAACAGTTTCTGTACTCCCTTTAAGTGTAGCTTGGAAGAGTCAGCAGGTAAAACAATGGTATTGGGTACCAAAGCACAAGTTGCTTCCAGAGAAGTGCTGGATTCTTCTATATTTCTGCCTAGGAAACAAGGAAATGTAGGTAAAGCTTCAGAAACTGTTGGTAATGTCGGTGAGAGAGGTGGTGAAAGGGTTCTGGGAATGATTGCAGACCTGATGATACAGAGGATTGATGTTCCTAACTCCAGTCTGCTGAAAACGAAAAATGAAGAACTTGCAAGTCGAGGTAAACTAGAGCTTCCCTGTGAGGTGGATGATGGATTGGAGGTGGCTTCAGGAGTTGCAAGAGAAATGGAGCCAGAGGTTAGTATATATAGGGAGGCCTCAGGAAGCTCGTTTTCGACAGAAGAGAAAACTGGTGATATAGTTAATCTGAATTCCATTGACTCTTCATATCCAGATAAAAATGATAGCCTGATAGAAACTGAACCTAGAAGCAAGTCATATAATGTTCAAGTTAAGTCTGAAAACTTATATTCCACCAAGGTGATGGGGGAAGATCCGAAATTGTCAATGAAAAATCAGCAGCTGTGCATAGAGGTGAAAGAGCAATCACAAGAGAGGGGTCTTGGAACATGTCAAGCTAATGATGGGCTTTGTGGTCGGGGATCATCTCCCTTGACTACACCTAAAGATGTGGTTGGTGGTGGATTTGATCTGAATGAAGGTATCCTGGCAGATGAAGTGGAGTACCCTAAACAGCTGGTGAATGAAACTTCATCGTCCTGTCATGTGGTGAATGTGTCAGCGCCAATACCTGTGGTAGCTAAATCCAGGGTTCCCTTGTGCTTACCCATGCCTCCATTGCAGTTTGAAGGACAGCTATGTTGGAAGGGTTCTGCAGCAACTAGTGCTTTTCGGCCAGCTTCTGTTTCTCATAGTCCTAATAAAAGGAAGGCACTTTCCAACAGTGATGATAACCATAGTTCAAGACACTCACAGGGTTTGAAGGGGTTTGACCTCAATGTTGCAGCTGAAGAGTCTTCCCTGGAAGTTAGTCCAAAACGAGCTGAAAGGCCTAATCTTGACCTCAATTGTCTCAGTGAAGATGATAACTGTGAAGCTGCTCCACTAGTATCCTTACCAAGAAACAGTATCAGGGATATTGATCTGAATCACAACCAGTGGTTTGAGGATACATGCGAAGATGCTCAAGATTCAGGTCAAGGTTCTCAACTGTTGAGAGGCAGTGCAATGGATCCTGCTGTTTCTTGCACTGGAAATGTTAGACAACCTGGTGCTAGTGTTGTGAAGCCTGCCCAACCTGCATATAGGGCAGACCTGAGTTCTAAGCAGGGCTTTAGTCATGGAGCTCAAACTTTTCTGGTGGCTGCACCTGGAGTGATTCCGGGTATGGAAAACATGCGGACGCTACTTCCCTCACATCCCAATATGAGCTATACTCCACTGTCAGCCCAATCACTAGCTCATCCTTTCCCCTACAATAAGGGATTCTACTTTGACCCCACCAATCCCCTCGCCACTATATGCCATACGGGTGTTGTACCATGCATGACAGACCCACATGGGACTGCTGTCATCCCTCATGCGTTAGTTTCCAGCACTCCCCCGGCCTTCCCAATGGCCCCGCATCTTGTGAATGTTGCGGGTGGGCCAGGCCCCTGTGATGTTGCCATCATAAGGCACAGTCTAGATCTAAACGGTGGGGTAGGTTCAGAAAATGGAAGCAGAGGAGGAAATGCTGCACAGCTTTTCGTACCTGTCGGTAATTCATTGGTGCAGGAGCAAATGAAGTCTTTCCAACAATTTGCTTTGCCTGCCACACCCATAAAGAGGAGGGAGCCTGATGGTGGATGGGACTGTCACCAGCTTGGCTATAGACAGGTGACTTATCAGCAATAG 2685 0.4413 MEQKNFKVSVMTSNVRHLHDQQKLETFGNLKNSFDCYGKYSHGNTEIEKQEHESDPEINSYEAVSLTEMEIKCLNYDYVSSSDCITTDANNSKQLCSAVSTSRSSTVGVGIYKHGGAEGTSGEMVCNKVVPSSTCQNRFAGNECSNDGETSAHFIGGIDSVQQICINSGIKLETGQPLKKEVNELDLGRRKGNLLNADEDVLKSIVQATFHDKQLKTESSSSNSSHVFLPASSNDSCQEPSLDVKSCKHSKSSGMNSFCTPFKCSLEESAGKTMVLGTKAQVASREVLDSSIFLPRKQGNVGKASETVGNVGERGGERVLGMIADLMIQRIDVPNSSLLKTKNEELASRGKLELPCEVDDGLEVASGVAREMEPEVSIYREASGSSFSTEEKTGDIVNLNSIDSSYPDKNDSLIETEPRSKSYNVQVKSENLYSTKVMGEDPKLSMKNQQLCIEVKEQSQERGLGTCQANDGLCGRGSSPLTTPKDVVGGGFDLNEGILADEVEYPKQLVNETSSSCHVVNVSAPIPVVAKSRVPLCLPMPPLQFEGQLCWKGSAATSAFRPASVSHSPNKRKALSNSDDNHSSRHSQGLKGFDLNVAAEESSLEVSPKRAERPNLDLNCLSEDDNCEAAPLVSLPRNSIRDIDLNHNQWFEDTCEDAQDSGQGSQLLRGSAMDPAVSCTGNVRQPGASVVKPAQPAYRADLSSKQGFSHGAQTFLVAAPGVIPGMENMRTLLPSHPNMSYTPLSAQSLAHPFPYNKGFYFDPTNPLATICHTGVVPCMTDPHGTAVIPHALVSSTPPAFPMAPHLVNVAGGPGPCDVAIIRHSLDLNGGVGSENGSRGGNAAQLFVPVGNSLVQEQMKSFQQFALPATPIKRREPDGGWDCHQLGYRQVTYQQ* 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1618 894 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED 52 891 - -
Vvi18g1618 894 MobiDBLite consensus disorder prediction 213 251 - -
Vvi18g1618 894 MobiDBLite consensus disorder prediction 573 587 - -
Vvi18g1618 894 MobiDBLite consensus disorder prediction 561 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1618 Vvi-Chr18 20804758 20807442 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1618 - - vvi:100855325 1768.82