Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1606 ATGGCGGCTCCGAGAAACTTGGGGAACGATGGTGGGAGGTTGAGGGACGAGGAGAACGCGAATGAGGATGATTCTCCGACCACCAAGAAGCCGGCTGGTGTGAAAATTGACGGGAGATTCCCGCTGACAAGGTGGGAGTTCACGGTGGCTCTGGGAGTGTTTGTGTTCTTCTCCATCGGTTTGTTTTGTATTTACTTGACAATGCCGGCCGCGGAGTATGGACGGATTAGGCTGCCTCGGACAATTTCGGATCTCCGCATGCTCAAAGATCAACTTGCAACATATGCAAATGATTACCCAGCTCAATTTATCATGGGTTACTGCTCAACTTACATCTTCATGCAGACATTTATGATTCCGGGCACCATTTTTATGTCATTGCTCGCTGGAGCTCTTTTTGGTGTTGTCAGGGGCCTTTTCTTGGTTGTCTTCAATGCCACAGCTGGTGCATCATCCTGCTATTTTCTCTCAAAGTTAATTGGAAGGCCTTTAGTTAACTGGCTGTGGCCTGAAAAGTTGAGATTGTTTCAGGCAGAGATTTCAAAACGCAGGGAGAAGCTACTAAATTACATGCTCTTTTTGCGGATAACTCCAACCTTGCCCAACCTTTTTATCAATTTGGCCTCTCCAATTGTGGATATACCATTTCATGTTTTCTTTCTAGCTACATTGGTCGGTCTTATTCCAGCATCTTACATCACAGTCAGAGCTGGGCTTGCTCTTGGGGATCTCAAGTCAGTGAAGGATCTATATGATTTTAAAACTTTGTCAGTGCTTTTCCTCATCGGATTTATTTCCATACTTCCTACACTTCTGAAGAGAAAGCGAACATATGAATGA 840 0.45 MAAPRNLGNDGGRLRDEENANEDDSPTTKKPAGVKIDGRFPLTRWEFTVALGVFVFFSIGLFCIYLTMPAAEYGRIRLPRTISDLRMLKDQLATYANDYPAQFIMGYCSTYIFMQTFMIPGTIFMSLLAGALFGVVRGLFLVVFNATAGASSCYFLSKLIGRPLVNWLWPEKLRLFQAEISKRREKLLNYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLVGLIPASYITVRAGLALGDLKSVKDLYDFKTLSVLFLIGFISILPTLLKRKRTYE* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1606 279 MobiDBLite consensus disorder prediction 10 30 - -
Vvi18g1606 279 Pfam SNARE associated Golgi protein 119 238 IPR032816 -
Vvi18g1606 279 PANTHER - 15 276 IPR045014 -
Vvi18g1606 279 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1606 Vvi-Chr18 20571853 20583291 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1606 - - vvi:100252172 545.814