Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1605 ATGGACGGAAGTAAAGAGTTTGGGCTTAAGAATGTCAGCTCCCATTGCTCCATTTCGGAAATGGCCGACTATGACCTCTCCCGGCTGCTTGATAAGCCACGGTTGAATATCGAGAGGCAGAGGTCATTTGACGAGAGATCAATGAGTGAGCTGTCCATTGGTCTTGCAAGACACTTAGAACACTTGGACAGCATGTATTCGCCAGGTGGAAGGTCAGGCTTTGACACCCCTGCCTCATCGGCCAGGAACTCATTCGAGCCCCATCCAATGGTTAATGAAGCCTGGGAAGCTCTGCGGCGCTCCTTGGTCTTCTTCCGGGGGCAACCTGTTGGCACCATTGCTGCCTATGATCATGCTTCGGAGGAAGTTCTAAATTATGATCAGGTTTTTGTACGAGATTTTGTACCTAGTGCTCTGGCTTTTCTAATGAATGGTGAGCCTGAGATAGTTAAAAATTTCCTTTTGAAGACTCTGCATCTTCAAGGGTGGGAAAAAAGAATTGATAGATTCAAGCTTGGAGAAGGTGCAATGCCAGCTAGCTTCAAAGTTCTTCATGATCCTATTCGGAAAACGGATACTCTAATTGCAGATTTCGGTGAGAGTGCAATTGGACGAGTGGCTCCAGTTGACTCTGGATTCTGGTGGATTATTCTGCTCCGGGCCTATACAAAGTCCACTGGGGATTTATCTTTAGCTGAAACACCAGAGTGTCAAAAGGGAATGAAGCTTATATTGACTTTATGCCTCTCGGAGGGGTTTGATACATTTCCAACTCTGCTTTGTGCTGATGGATGCTCTATGGTTGACCGAAGAATGGTAAGATTTCCTTGCAAATTTAATTTTACCATGCTACTGCAAGTTACGGTTCAGTTGCAAGCCTGTGTAGGATATGAGTGCATGCAGTTGCTTTCATATGGGCTTTTGATTTGTATAAGAGACTTTCTTGTGGAGTTTGACATTCAACTCAAAACTGTTATCGGGTGTGTTGTGGTTGGCCGCCATGAATTAGATTATGTGGGTTCTAATTTGGTTGACAAATTTGTTGAAAGCTAA 1053 0.4454 MDGSKEFGLKNVSSHCSISEMADYDLSRLLDKPRLNIERQRSFDERSMSELSIGLARHLEHLDSMYSPGGRSGFDTPASSARNSFEPHPMVNEAWEALRRSLVFFRGQPVGTIAAYDHASEEVLNYDQVFVRDFVPSALAFLMNGEPEIVKNFLLKTLHLQGWEKRIDRFKLGEGAMPASFKVLHDPIRKTDTLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDLSLAETPECQKGMKLILTLCLSEGFDTFPTLLCADGCSMVDRRMVRFPCKFNFTMLLQVTVQLQACVGYECMQLLSYGLLICIRDFLVEFDIQLKTVIGCVVVGRHELDYVGSNLVDKFVES* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1605 350 Pfam Alkaline and neutral invertase 94 274 IPR024746 GO:0033926
Vvi18g1605 350 PANTHER - 74 273 IPR024746 GO:0033926
Vvi18g1605 350 SUPERFAMILY Six-hairpin glycosidases 97 258 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1605 Vvi-Chr18 20554543 20555816 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1605 - - vvi:100257298 553.132